Aliases for LOC100418965 Gene

Aliases for LOC100418965 Gene

  • Peroxiredoxin 5 Pseudogene 3

External Ids for LOC100418965 Gene

Previous GeneCards Identifiers for LOC100418965 Gene

  • GC01U902971
  • GC01M076820

Summaries for LOC100418965 Gene

GeneCards Summary for LOC100418965 Gene

LOC100418965 (Peroxiredoxin 5 Pseudogene) is a Pseudogene.

Additional gene information for LOC100418965 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100418965 Gene

Genomics for LOC100418965 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100418965 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J076336 Enhancer 0.9 Ensembl ENCODE 0.4 +16.9 16924 1.5 ZIC2 ZNF843 ZBTB48 ZNF24 ZNF398 ZFP69B ZNF701 ZBTB12 POLR2A ZBTB8A RPL17P6 LOC100418965 HSALNG0004547 ST6GALNAC3 ST6GALNAC5
GH01J076330 Enhancer 0.6 Ensembl 0.4 +23.1 23138 0.6 ZNF654 CTCF TRIM22 RAD21 SMC3 ZNF2 ATF4 ZNF143 ZNF660 CEBPB LOC100418965 HSALNG0004547 ST6GALNAC3 ST6GALNAC5
GH01J076351 Enhancer 0.3 Ensembl 0.7 +2.3 2338 0.2 SP7 LOC100418965 HSALNG0004547 ST6GALNAC3 ST6GALNAC5
GH01J076278 Enhancer 0.7 Ensembl CraniofacialAtlas 0.2 +75.0 74981 1.1 GABPB1 JUND BHLHE40 GLIS1 GATA2 TRIM28 YY1 MZF1 ZBTB17 ZBTB6 HSALNG0004547 LOC100418965 ST6GALNAC3 ST6GALNAC5
GH01J076298 Enhancer 0.5 Ensembl 0.2 +54.0 54038 4 PRDM6 ZNF189 ZNF561 ZBTB8A PKNOX1 ZBTB17 ZNF335 SCRT2 MSH4 ACADM HSALNG0004547 LOC100418965 ST6GALNAC3 ST6GALNAC5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100418965 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100418965 Gene

Latest Assembly
chr1:76,353,580-76,354,239
(GRCh38/hg38)
Size:
660 bases
Orientation:
Minus strand

Previous Assembly
chr1:76,819,265-76,819,924
(GRCh37/hg19 by Entrez Gene)
Size:
660 bases
Orientation:
Minus strand

Genomic View for LOC100418965 Gene

Genes around LOC100418965 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100418965 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100418965 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100418965 Gene

Proteins for LOC100418965 Gene

Post-translational modifications for LOC100418965 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100418965 Gene

Domains & Families for LOC100418965 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100418965 Gene

Function for LOC100418965 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100418965 Gene

Localization for LOC100418965 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100418965 Gene

Pathways & Interactions for LOC100418965 Gene

PathCards logo

SuperPathways for LOC100418965 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100418965 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100418965 Gene

Drugs & Compounds for LOC100418965 Gene

No Compound Related Data Available

Transcripts for LOC100418965 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100418965 Gene

No ASD Table

Relevant External Links for LOC100418965 Gene

GeneLoc Exon Structure for
LOC100418965

No data available for mRNA/cDNA for LOC100418965 Gene

Expression for LOC100418965 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100418965 Gene

genes like me logo Genes that share expression patterns with LOC100418965: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100418965 Gene

Orthologs for LOC100418965 Gene

No data available for Orthologs and Evolution for LOC100418965 Gene

Paralogs for LOC100418965 Gene

No data available for Paralogs for LOC100418965 Gene

Variants for LOC100418965 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100418965 Gene

Disorders for LOC100418965 Gene

No disorders were found for LOC100418965 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100418965 Gene

Publications for LOC100418965 Gene

No publications were found for LOC100418965 Gene.

No data available for Mastermind for LOC100418965 Gene

Products for LOC100418965 Gene

Sources for LOC100418965 Gene