Aliases for LOC100418874 Gene

Aliases for LOC100418874 Gene

  • Cathepsin B Pseudogene 3

External Ids for LOC100418874 Gene

Previous GeneCards Identifiers for LOC100418874 Gene

  • GC01U902871
  • GC01P227423

Summaries for LOC100418874 Gene

GeneCards Summary for LOC100418874 Gene

LOC100418874 (Cathepsin B Pseudogene) is a Pseudogene.

Additional gene information for LOC100418874 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100418874 Gene

Genomics for LOC100418874 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100418874 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J227235 Enhancer 0.9 ENCODE 250.7 +1.0 964 0.2 ZNF654 MYC NCOR1 ZNF592 REST HES1 MNT HOMEZ CTCF ARNT ENSG00000228729 LOC100418874 lnc-COQ8A-6 piR-55036-009 CDC42BPA LINC01641 HSALNG0011132 lnc-JMJD4-6 lnc-ITPKB-4 COQ8A
GH01J227237 Enhancer 0.8 Ensembl 250.7 +1.5 1509 0.6 MYC ZNF592 HES1 MNT NBN SAP130 TAL1 ZNF316 NCOR1 NFE2 ENSG00000228729 LOC100418874 lnc-COQ8A-6 CDC42BPA LINC01641 COQ8A PSEN2 HSALNG0011132 lnc-JMJD4-6 lnc-ITPKB-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100418874 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100418874 Gene

Latest Assembly
chr1:227,234,191-227,235,354
(GRCh38/hg38)
Size:
1,164 bases
Orientation:
Plus strand

Previous Assembly
chr1:227,421,892-227,423,055
(GRCh37/hg19 by Entrez Gene)
Size:
1,164 bases
Orientation:
Plus strand

Genomic View for LOC100418874 Gene

Genes around LOC100418874 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100418874 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100418874 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100418874 Gene

Proteins for LOC100418874 Gene

Post-translational modifications for LOC100418874 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100418874 Gene

Domains & Families for LOC100418874 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100418874 Gene

Function for LOC100418874 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100418874 Gene

Localization for LOC100418874 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100418874 Gene

Pathways & Interactions for LOC100418874 Gene

PathCards logo

SuperPathways for LOC100418874 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100418874 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100418874 Gene

Drugs & Compounds for LOC100418874 Gene

No Compound Related Data Available

Transcripts for LOC100418874 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100418874 Gene

No ASD Table

Relevant External Links for LOC100418874 Gene

GeneLoc Exon Structure for
LOC100418874

No data available for mRNA/cDNA for LOC100418874 Gene

Expression for LOC100418874 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100418874 Gene

genes like me logo Genes that share expression patterns with LOC100418874: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100418874 Gene

Orthologs for LOC100418874 Gene

No data available for Orthologs and Evolution for LOC100418874 Gene

Paralogs for LOC100418874 Gene

No data available for Paralogs for LOC100418874 Gene

Variants for LOC100418874 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100418874 Gene

Disorders for LOC100418874 Gene

No disorders were found for LOC100418874 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100418874 Gene

Publications for LOC100418874 Gene

No publications were found for LOC100418874 Gene.

No data available for Mastermind for LOC100418874 Gene

Products for LOC100418874 Gene

Sources for LOC100418874 Gene