Aliases for LOC100291628 Gene

Aliases for LOC100291628 Gene

  • Penta-EF-Hand Domain Containing 1 Pseudogene 3

External Ids for LOC100291628 Gene

Previous GeneCards Identifiers for LOC100291628 Gene

  • GC00U927679
  • GC01U902453
  • GC01M204498

Summaries for LOC100291628 Gene

GeneCards Summary for LOC100291628 Gene

LOC100291628 (Penta-EF-Hand Domain Containing 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100291628 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100291628 Gene

Genomics for LOC100291628 Gene

GeneHancer (GH) Regulatory Elements for LOC100291628 Gene

Promoters and enhancers for LOC100291628 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J204530 Enhancer 1 Ensembl ENCODE dbSUPER 750.6 -1.5 -1474 2 ETV6 RELA MLLT1 CREM ZBED1 IKZF1 BACH1 TRIM22 IKZF2 PKNOX1 ENSG00000236779 LOC100291628 PIK3C2B NONHSAG004033.2 MDM4
GH01J204528 Enhancer 0.3 dbSUPER 750.6 +1.0 991 1.4 GLIS2 ENSG00000236779 LOC100291628 PIK3C2B MDM4
GH01J204536 Enhancer 0.2 dbSUPER 0.4 -7.9 -7878 2.1 NONHSAG004033.2 PIK3C2B MDM4 LRRN2 LOC100291628
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100291628 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100291628 Gene

Genomic Locations for LOC100291628 Gene
chr1:204,528,093-204,529,727
(GRCh38/hg38)
Size:
1,635 bases
Orientation:
Minus strand
chr1:204,497,222-204,498,855
(GRCh37/hg19)
Size:
1,634 bases
Orientation:
Minus strand

Genomic View for LOC100291628 Gene

Genes around LOC100291628 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100291628 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100291628 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100291628 Gene

Proteins for LOC100291628 Gene

Post-translational modifications for LOC100291628 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100291628 Gene

Domains & Families for LOC100291628 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100291628 Gene

Function for LOC100291628 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100291628 Gene

Localization for LOC100291628 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100291628 Gene

Pathways & Interactions for LOC100291628 Gene

PathCards logo

SuperPathways for LOC100291628 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100291628 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100291628 Gene

Drugs & Compounds for LOC100291628 Gene

No Compound Related Data Available

Transcripts for LOC100291628 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100291628 Gene

No ASD Table

Relevant External Links for LOC100291628 Gene

GeneLoc Exon Structure for
LOC100291628

No data available for mRNA/cDNA for LOC100291628 Gene

Expression for LOC100291628 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100291628 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100291628 Gene

This gene is overexpressed in Testis (x4.4).
genes like me logo Genes that share expression patterns with LOC100291628: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100291628 Gene

Orthologs for LOC100291628 Gene

No data available for Orthologs and Evolution for LOC100291628 Gene

Paralogs for LOC100291628 Gene

No data available for Paralogs for LOC100291628 Gene

Variants for LOC100291628 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100291628 Gene

Disorders for LOC100291628 Gene

No disorders were found for LOC100291628 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100291628 Gene

Publications for LOC100291628 Gene

No publications were found for LOC100291628 Gene.

No data available for External Links for LOC100291628 Gene

Products for LOC100291628 Gene

Sources for LOC100291628 Gene