LOC100289381 Gene (Pseudogene)

Adaptor Related Protein Complex 3 Subunit Sigma 1 Pseudogene

GC06M024751
GIFtS:
2
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Aliases for LOC100289381 Gene

Aliases for LOC100289381 Gene

  • Adaptor Related Protein Complex 3 Subunit Sigma 1 Pseudogene 3
  • Adaptor Related Protein Complex 3 Sigma 1 Subunit Pseudogene 3

External Ids for LOC100289381 Gene

Previous GeneCards Identifiers for LOC100289381 Gene

  • GC00U926063

Summaries for LOC100289381 Gene

GeneCards Summary for LOC100289381 Gene

LOC100289381 (Adaptor Related Protein Complex 3 Subunit Sigma 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100289381 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100289381 Gene

Genomics for LOC100289381 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC100289381 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J024752 Enhancer 0.5 Ensembl 600.7 -1.5 -1470 0.6 CEBPA CEBPB CEBPG ZNF3 HLF CREB1 ENSG00000218806 LOC100289381 lnc-C6orf62-2 C6orf62 piR-57135-032 GMNN
GH06J024756 Enhancer 0.7 Ensembl 0.4 -6.3 -6270 1.8 ZNF740 FOXJ2 ZNF766 NR2C2 ZBTB11 MAFG GTF2A2 CUX1 TFDP1 ZNF395 ENSG00000272402 piR-57135-032 LOC100289381 GMNN C6orf62
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100289381 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100289381 Gene

Genomic Locations for LOC100289381 Gene
chr6:24,750,477-24,751,631
(GRCh38/hg38)
Size:
1,155 bases
Orientation:
Minus strand
chr6:24,750,899-24,751,853
(GRCh37/hg19)
Size:
955 bases
Orientation:
Minus strand

Genomic View for LOC100289381 Gene

Genes around LOC100289381 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100289381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100289381 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC100289381 Gene

Proteins for LOC100289381 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC100289381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100289381 Gene

Domains & Families for LOC100289381 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100289381 Gene

Function for LOC100289381 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100289381 Gene

Localization for LOC100289381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100289381 Gene

Pathways & Interactions for LOC100289381 Gene

PathCards logo

SuperPathways for LOC100289381 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100289381 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100289381 Gene

Drugs & Compounds for LOC100289381 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC100289381 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100289381 Gene

No ASD Table

Relevant External Links for LOC100289381 Gene

GeneLoc Exon Structure for
LOC100289381

No data available for mRNA/cDNA for LOC100289381 Gene

Expression for LOC100289381 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100289381 Gene

mRNA expression in normal human tissues for LOC100289381 Gene
mRNA expression by GTEx for LOC100289381 Gene
genes like me logo Genes that share expression patterns with LOC100289381: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100289381 Gene

Orthologs for LOC100289381 Gene

No data available for Orthologs and Evolution for LOC100289381 Gene

Paralogs for LOC100289381 Gene

No data available for Paralogs for LOC100289381 Gene

Variants for LOC100289381 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100289381 Gene

Disorders for LOC100289381 Gene

No disorders were found for LOC100289381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100289381 Gene

Publications for LOC100289381 Gene

No publications were found for LOC100289381 Gene.

No data available for Mastermind for LOC100289381 Gene

Products for LOC100289381 Gene

Sources for LOC100289381 Gene