Aliases for LOC100289351 Gene

Aliases for LOC100289351 Gene

  • Ribosomal Protein S12 Pseudogene 3
  • Ribosomal Protein S12 (RPS12) Pseudogene 5
  • AL596448.1 5

External Ids for LOC100289351 Gene

Previous GeneCards Identifiers for LOC100289351 Gene

  • GC00U929068
  • GC09P075013

Summaries for LOC100289351 Gene

GeneCards Summary for LOC100289351 Gene

LOC100289351 (Ribosomal Protein S12 Pseudogene) is a Pseudogene.

Additional gene information for LOC100289351 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100289351 Gene

Genomics for LOC100289351 Gene

GeneHancer (GH) Regulatory Elements for LOC100289351 Gene

Promoters and enhancers for LOC100289351 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J072473 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.7 +3.0 3046 4 FOS EP300 RELA BCL11A ARNT NBN BATF ELF1 MAFK IRF4 TMC1 ZFAND5 LOC105376080 LOC100289351
GH09J072475 Enhancer 0.9 ENCODE 0.4 +7.4 7379 3.6 TCF12 JUND FOS TCF7 TRIM28 CTBP1 EP300 JUN TEAD1 TBX3 LOC105376080 TMC1 ZFAND5 LOC100289351
GH09J072462 Enhancer 0.8 Ensembl ENCODE 0.4 -6.2 -6173 4 ZBTB40 FOS SPI1 GABPA RXRA GATA2 ATF2 JUN JUND ATF7 ZFAND5 LINC01504 TMC1 LOC100289351 lnc-ZFAND5-2 ENSG00000230003
GH09J072454 Enhancer 0.8 Ensembl ENCODE 0.4 -15.3 -15273 2.2 TEAD4 NANOG GATA3 RAD21 HMG20A HNF4A CHD7 SOX5 CEBPG CEBPB ZFAND5 ENSG00000230003 lnc-ZFAND5-2 LOC100289351
GH09J072460 Enhancer 0.7 Ensembl 0.4 -9.4 -9374 0.4 TCF12 MAFF FOSL2 MAFK MEF2B NBN NFE2 NR2F1 RXRA NFE2L2 LOC100289351 lnc-ZFAND5-2 ENSG00000230003
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100289351 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100289351 Gene

Genomic Locations for LOC100289351 Gene
chr9:72,470,374-72,471,076
(GRCh38/hg38)
Size:
703 bases
Orientation:
Plus strand
chr9:75,085,290-75,085,992
(GRCh37/hg19)
Size:
703 bases
Orientation:
Plus strand

Genomic View for LOC100289351 Gene

Genes around LOC100289351 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100289351 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100289351 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100289351 Gene

Proteins for LOC100289351 Gene

Post-translational modifications for LOC100289351 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100289351 Gene

Domains & Families for LOC100289351 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100289351 Gene

Function for LOC100289351 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100289351 Gene

Localization for LOC100289351 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100289351 Gene

Pathways & Interactions for LOC100289351 Gene

PathCards logo

SuperPathways for LOC100289351 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100289351 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100289351 Gene

Drugs & Compounds for LOC100289351 Gene

No Compound Related Data Available

Transcripts for LOC100289351 Gene

mRNA/cDNA for LOC100289351 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100289351 Gene

No ASD Table

Relevant External Links for LOC100289351 Gene

GeneLoc Exon Structure for
LOC100289351

Expression for LOC100289351 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100289351 Gene

genes like me logo Genes that share expression patterns with LOC100289351: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100289351 Gene

Orthologs for LOC100289351 Gene

Evolution for LOC100289351 Gene

ENSEMBL:
Gene Tree for LOC100289351 (if available)
TreeFam:
Gene Tree for LOC100289351 (if available)

No data available for Orthologs for LOC100289351 Gene

Paralogs for LOC100289351 Gene

No data available for Paralogs for LOC100289351 Gene

Variants for LOC100289351 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100289351 Gene

Disorders for LOC100289351 Gene

No disorders were found for LOC100289351 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100289351 Gene

Publications for LOC100289351 Gene

No publications were found for LOC100289351 Gene.

No data available for Mastermind for LOC100289351 Gene

Products for LOC100289351 Gene

Sources for LOC100289351 Gene