Aliases for LOC100288771 Gene

Aliases for LOC100288771 Gene

  • Prefoldin Subunit 1 Pseudogene 3

External Ids for LOC100288771 Gene

Previous GeneCards Identifiers for LOC100288771 Gene

  • GC00U927351
  • GC04P015744
  • GC04P015746

Summaries for LOC100288771 Gene

GeneCards Summary for LOC100288771 Gene

LOC100288771 (Prefoldin Subunit 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100288771 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100288771 Gene

Genomics for LOC100288771 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100288771 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J015743 Enhancer 0.3 Ensembl dbSUPER 250.7 +0.5 469 0.2 ENSG00000248188 LOC100288771 lnc-BST1-1 CD38 BST1 LOC107986186 HSALNG0033063
GH04J015753 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.4 +12.2 12181 4.4 RXRA IRF4 EBF1 TCF7L2 RAD21 CTCF MYC MAX POLR2A NR2F1 HSALNG0033063 LOC107986186 CD38 RPL10AP7 TAPT1 FBXL5 LOC100288771 BST1
GH04J015747 Enhancer 0.3 dbSUPER 0.4 +5.2 5167 1.1 POLR2A CD38 BST1 RPL10AP7 HSALNG0033063 LOC100288771 LOC107986186
GH04J015745 Enhancer 0.2 dbSUPER 0.7 +3.3 3336 2.4 CD38 BST1 LOC100288771 LOC107986186 HSALNG0033063
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100288771 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100288771 Gene

Latest Assembly
chr4:15,743,232-15,743,582
(GRCh38/hg38)
Size:
351 bases
Orientation:
Plus strand

Previous Assembly
chr4:15,744,855-15,745,205
(GRCh37/hg19 by Entrez Gene)
Size:
351 bases
Orientation:
Plus strand

Genomic View for LOC100288771 Gene

Genes around LOC100288771 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100288771 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100288771 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100288771 Gene

Proteins for LOC100288771 Gene

Post-translational modifications for LOC100288771 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100288771 Gene

Domains & Families for LOC100288771 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100288771 Gene

Function for LOC100288771 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100288771 Gene

Localization for LOC100288771 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100288771 Gene

Pathways & Interactions for LOC100288771 Gene

PathCards logo

SuperPathways for LOC100288771 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100288771 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100288771 Gene

Drugs & Compounds for LOC100288771 Gene

No Compound Related Data Available

Transcripts for LOC100288771 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100288771 Gene

No ASD Table

Relevant External Links for LOC100288771 Gene

GeneLoc Exon Structure for
LOC100288771

No data available for mRNA/cDNA for LOC100288771 Gene

Expression for LOC100288771 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100288771 Gene

genes like me logo Genes that share expression patterns with LOC100288771: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100288771 Gene

Orthologs for LOC100288771 Gene

No data available for Orthologs and Evolution for LOC100288771 Gene

Paralogs for LOC100288771 Gene

No data available for Paralogs for LOC100288771 Gene

Variants for LOC100288771 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100288771 Gene

Disorders for LOC100288771 Gene

No disorders were found for LOC100288771 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100288771 Gene

Publications for LOC100288771 Gene

No publications were found for LOC100288771 Gene.

No data available for Mastermind for LOC100288771 Gene

Products for LOC100288771 Gene

Sources for LOC100288771 Gene