Aliases for LOC100288385 Gene

Aliases for LOC100288385 Gene

  • Cytochrome C Oxidase Subunit 7A2 Like Pseudogene 3

External Ids for LOC100288385 Gene

Previous GeneCards Identifiers for LOC100288385 Gene

  • GC00U925450
  • GC11P113640

Summaries for LOC100288385 Gene

GeneCards Summary for LOC100288385 Gene

LOC100288385 (Cytochrome C Oxidase Subunit 7A2 Like Pseudogene) is a Pseudogene.

Additional gene information for LOC100288385 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100288385 Gene

Genomics for LOC100288385 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100288385 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J113771 Promoter 0.3 Ensembl 600.7 +1.9 1897 0.6 ENSG00000256603 ENSG00000257070 LOC100288385 lnc-CLDN25-2 DRD2 ZW10 lnc-ZW10-1 TMPRSS5
GH11J113770 Enhancer 0.2 FANTOM5 600.7 +1.3 1255 0.1 ENSG00000256603 ENSG00000257070 LOC100288385 lnc-CLDN25-2 DRD2 ZW10 lnc-ZW10-1 TMPRSS5
GH11J113767 Enhancer 0.4 FANTOM5 Ensembl 0.7 -2.4 -2439 0.3 CLDN25 LOC100288385 piR-58929-017 ZW10 lnc-ZW10-1 TMPRSS5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100288385 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100288385 Gene

Genomic Locations for LOC100288385 Gene
chr11:113,769,604-113,769,863
(GRCh38/hg38)
Size:
260 bases
Orientation:
Plus strand
chr11:113,640,382-113,640,721
(GRCh37/hg19)
Size:
340 bases
Orientation:
Plus strand

Genomic View for LOC100288385 Gene

Genes around LOC100288385 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100288385 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100288385 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100288385 Gene

Proteins for LOC100288385 Gene

Post-translational modifications for LOC100288385 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100288385 Gene

Domains & Families for LOC100288385 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100288385 Gene

Function for LOC100288385 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100288385 Gene

Localization for LOC100288385 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100288385 Gene

Pathways & Interactions for LOC100288385 Gene

PathCards logo

SuperPathways for LOC100288385 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100288385 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100288385 Gene

Drugs & Compounds for LOC100288385 Gene

No Compound Related Data Available

Transcripts for LOC100288385 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100288385 Gene

No ASD Table

Relevant External Links for LOC100288385 Gene

GeneLoc Exon Structure for
LOC100288385

No data available for mRNA/cDNA for LOC100288385 Gene

Expression for LOC100288385 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100288385 Gene

genes like me logo Genes that share expression patterns with LOC100288385: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100288385 Gene

Orthologs for LOC100288385 Gene

No data available for Orthologs and Evolution for LOC100288385 Gene

Paralogs for LOC100288385 Gene

No data available for Paralogs for LOC100288385 Gene

Variants for LOC100288385 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100288385 Gene

Disorders for LOC100288385 Gene

No disorders were found for LOC100288385 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100288385 Gene

Publications for LOC100288385 Gene

No publications were found for LOC100288385 Gene.

No data available for Mastermind for LOC100288385 Gene

Products for LOC100288385 Gene

Sources for LOC100288385 Gene