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Aliases for LOC100288379 Gene

Aliases for LOC100288379 Gene

  • Ribosomal Protein S7 Pseudogene 3
  • AL691432.1 5

External Ids for LOC100288379 Gene

Previous GeneCards Identifiers for LOC100288379 Gene

  • GC00U927029
  • GC01P001602
  • GC01P000883

Summaries for LOC100288379 Gene

GeneCards Summary for LOC100288379 Gene

LOC100288379 (Ribosomal Protein S7 Pseudogene) is a Pseudogene.

Additional gene information for LOC100288379 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100288379 Gene

Genomics for LOC100288379 Gene

GeneHancer (GH) Regulatory Elements for LOC100288379 Gene

Promoters and enhancers for LOC100288379 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I001669 Enhancer 0.5 dbSUPER 550.8 -1.7 -1708 2.3 ZNF335 POLR2A ZBTB33 MYC LOC100288379 SLC35E2B LOC100129381 GC01P001660
GH01I001397 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 49.2 -271.9 -271876 5.5 MLX DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SSRP1 CCNL2 LOC148413 INTS11 ATAD3B ENSG00000240731 LOC100288379 ENSG00000230092 CDK11A SLC35E2 LOC100129381
GH01I001373 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 45 -296.9 -296867 3.9 CLOCK MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF213 E2F8 AURKAIP1 GC01M001374 CDK11A ENSG00000230092 ATAD3B LOC100288379 ENSG00000237094 LINC01786 LOC100288069 CCNL2
GH01I002543 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 37.5 +875.1 875096 7.5 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF143 SP3 NFYC MEF2D ENSG00000272449 GC01M002542 LOC100288379 CDK11A SLC35E2 LOC100129381 TNFRSF14 FAAP20 MMEL1 RER1
GH01I001745 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 30.9 +74.1 74111 2.2 PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF766 E2F8 ZNF207 ZNF143 SLC35E2 LOC100288379 CCNL2 ENSG00000230092 RER1 SDF4 CDK11A INTS11 LOC100129381 MXRA8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100288379 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100288379 gene promoter:

Genomic Locations for LOC100288379 Gene

Genomic Locations for LOC100288379 Gene
chr1:1,671,990-1,674,435
(GRCh38/hg38)
Size:
2,446 bases
Orientation:
Plus strand
chr1:1,604,714-1,605,836
(GRCh37/hg19)

Genomic View for LOC100288379 Gene

Genes around LOC100288379 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100288379 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100288379 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100288379 Gene

Proteins for LOC100288379 Gene

Post-translational modifications for LOC100288379 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100288379 Gene

Domains & Families for LOC100288379 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100288379 Gene

Function for LOC100288379 Gene

Phenotypes From GWAS Catalog for LOC100288379 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100288379 Gene

Localization for LOC100288379 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100288379 Gene

Pathways & Interactions for LOC100288379 Gene

SuperPathways for LOC100288379 Gene

No Data Available

Interacting Proteins for LOC100288379 Gene

Gene Ontology (GO) - Biological Process for LOC100288379 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100288379 Gene

Drugs & Compounds for LOC100288379 Gene

No Compound Related Data Available

Transcripts for LOC100288379 Gene

mRNA/cDNA for LOC100288379 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100288379 Gene

No ASD Table

Relevant External Links for LOC100288379 Gene

GeneLoc Exon Structure for
LOC100288379

Expression for LOC100288379 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100288379 Gene

genes like me logo Genes that share expression patterns with LOC100288379: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100288379 Gene

Orthologs for LOC100288379 Gene

Evolution for LOC100288379 Gene

ENSEMBL:
Gene Tree for LOC100288379 (if available)
TreeFam:
Gene Tree for LOC100288379 (if available)

No data available for Orthologs for LOC100288379 Gene

Paralogs for LOC100288379 Gene

No data available for Paralogs for LOC100288379 Gene

Variants for LOC100288379 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100288379 Gene

Disorders for LOC100288379 Gene

No disorders were found for LOC100288379 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100288379 Gene

Publications for LOC100288379 Gene

No publications were found for LOC100288379 Gene.

Products for LOC100288379 Gene

Sources for LOC100288379 Gene

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