Aliases for LOC100287485 Gene

Aliases for LOC100287485 Gene

  • Glycine-N-Acyltransferase Like 2 Pseudogene 3

External Ids for LOC100287485 Gene

Previous GeneCards Identifiers for LOC100287485 Gene

  • GC00U923975
  • GC11M058763

Summaries for LOC100287485 Gene

GeneCards Summary for LOC100287485 Gene

LOC100287485 (Glycine-N-Acyltransferase Like 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100287485 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100287485 Gene

Genomics for LOC100287485 Gene

GeneHancer (GH) Regulatory Elements for LOC100287485 Gene

Promoters and enhancers for LOC100287485 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J058999 Enhancer 1.1 FANTOM5 Ensembl ENCODE 750.6 -0.1 -112 1.6 FOXA1 RAD21 SP1 IKZF1 RXRA IKZF2 FOXA2 PKNOX1 DPF2 JUND ENSG00000254786 LOC100287485 lnc-GLYATL2-5 LPXN FAM111A OR5B21 MPEG1 piR-47086-062 ENSG00000255240 LOC283194
GH11J059010 Enhancer 0.8 Ensembl ENCODE 0.4 -11.7 -11712 6 FOXA1 RAD21 SP1 RXRA FOXA2 JUND ATF3 YY1 NR2F2 GATA3 FAM111A FABP5P7 STX3 piR-47086-062 ENSG00000254786 lnc-GLYATL2-5 LOC100287485 ENSG00000255240 LOC283194 GLYATL1
GH11J058980 Enhancer 0.3 Ensembl 0.4 +19.2 19188 0.2 HNF4A RXRA GLYATL1P1 ENSG00000254786 LOC100287485 lnc-GLYATL2-5 ENSG00000255240 GLYATL1 LOC283194
GH11J058994 Enhancer 0.2 Ensembl 0.4 +5.4 5388 0.2 ENSG00000254786 lnc-GLYATL2-5 LOC100287485 GLYATL1P1 ENSG00000255240 LOC283194 GLYATL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100287485 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100287485 Gene

Genomic Locations for LOC100287485 Gene
chr11:58,995,766-58,999,689
(GRCh38/hg38)
Size:
3,924 bases
Orientation:
Minus strand
chr11:58,762,912-58,767,162
(GRCh37/hg19)
Size:
4,251 bases
Orientation:
Minus strand

Genomic View for LOC100287485 Gene

Genes around LOC100287485 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100287485 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100287485 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100287485 Gene

Proteins for LOC100287485 Gene

Post-translational modifications for LOC100287485 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100287485 Gene

Domains & Families for LOC100287485 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100287485 Gene

Function for LOC100287485 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100287485 Gene

Localization for LOC100287485 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100287485 Gene

Pathways & Interactions for LOC100287485 Gene

PathCards logo

SuperPathways for LOC100287485 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100287485 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100287485 Gene

Drugs & Compounds for LOC100287485 Gene

No Compound Related Data Available

Transcripts for LOC100287485 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100287485 Gene

No ASD Table

Relevant External Links for LOC100287485 Gene

GeneLoc Exon Structure for
LOC100287485

No data available for mRNA/cDNA for LOC100287485 Gene

Expression for LOC100287485 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100287485 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100287485 Gene

This gene is overexpressed in Prostate (x9.6), Minor Salivary Gland (x7.3), and Liver (x4.1).
genes like me logo Genes that share expression patterns with LOC100287485: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100287485 Gene

Orthologs for LOC100287485 Gene

No data available for Orthologs and Evolution for LOC100287485 Gene

Paralogs for LOC100287485 Gene

No data available for Paralogs for LOC100287485 Gene

Variants for LOC100287485 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100287485 Gene

Disorders for LOC100287485 Gene

No disorders were found for LOC100287485 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100287485 Gene

Publications for LOC100287485 Gene

No publications were found for LOC100287485 Gene.

No data available for External Links for LOC100287485 Gene

Products for LOC100287485 Gene

Sources for LOC100287485 Gene