Aliases for LOC100287355 Gene

Aliases for LOC100287355 Gene

  • Microtubule Associated Protein 1 Light Chain 3 Beta Pseudogene 3

External Ids for LOC100287355 Gene

Previous GeneCards Identifiers for LOC100287355 Gene

  • GC00U930637
  • GC12P089420

Summaries for LOC100287355 Gene

GeneCards Summary for LOC100287355 Gene

LOC100287355 (Microtubule Associated Protein 1 Light Chain 3 Beta Pseudogene) is a Pseudogene.

Additional gene information for LOC100287355 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100287355 Gene

Genomics for LOC100287355 Gene

GeneHancer (GH) Regulatory Elements for LOC100287355 Gene

Promoters and enhancers for LOC100287355 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J089026 Enhancer 0.2 dbSUPER 750.6 0.0 -18 1.5 ENSG00000257629 LOC100287355 lnc-TMTC3-9 GALNT4 POC1B piR-48965-032 LINC02458
GH12J089019 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -8.1 -8116 0.9 CTCF MIXL1 RAD21 KAT8 ZNF644 REST TRIM22 CTBP1 GTF2F1 ZNF561 GALNT4 POC1B DUSP6 LOC100287355 piR-48965-032 LINC02458
GH12J089017 Enhancer 0.9 ENCODE dbSUPER 0.4 -10.3 -10340 0.2 CTCF RAD21 PRDM1 REST ZBTB8A PRDM10 TRIM22 CTBP1 ZNF501 ZNF561 GALNT4 POC1B DUSP6 LOC100287355 piR-48965-032 LINC02458
GH12J088993 Enhancer 0.6 Ensembl ENCODE 0.3 -34.1 -34132 0.7 CTCF RAD21 SMC3 CEP290 piR-48965-032 LOC100287355
GH12J088994 Enhancer 0.3 Ensembl 0.3 -31.9 -31888 2.4 JUN CEP290 piR-48965-032 LOC100287355
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100287355 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100287355 Gene

Genomic Locations for LOC100287355 Gene
chr12:89,027,689-89,028,535
(GRCh38/hg38)
Size:
847 bases
Orientation:
Plus strand
chr12:89,421,466-89,422,312
(GRCh37/hg19)
Size:
847 bases
Orientation:
Plus strand

Genomic View for LOC100287355 Gene

Genes around LOC100287355 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100287355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100287355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100287355 Gene

Proteins for LOC100287355 Gene

Post-translational modifications for LOC100287355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100287355 Gene

Domains & Families for LOC100287355 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100287355 Gene

Function for LOC100287355 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100287355 Gene

Localization for LOC100287355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100287355 Gene

Pathways & Interactions for LOC100287355 Gene

PathCards logo

SuperPathways for LOC100287355 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100287355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100287355 Gene

Drugs & Compounds for LOC100287355 Gene

No Compound Related Data Available

Transcripts for LOC100287355 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100287355 Gene

No ASD Table

Relevant External Links for LOC100287355 Gene

GeneLoc Exon Structure for
LOC100287355

No data available for mRNA/cDNA for LOC100287355 Gene

Expression for LOC100287355 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100287355 Gene

genes like me logo Genes that share expression patterns with LOC100287355: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100287355 Gene

Orthologs for LOC100287355 Gene

No data available for Orthologs and Evolution for LOC100287355 Gene

Paralogs for LOC100287355 Gene

No data available for Paralogs for LOC100287355 Gene

Variants for LOC100287355 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100287355 Gene

Disorders for LOC100287355 Gene

No disorders were found for LOC100287355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100287355 Gene

Publications for LOC100287355 Gene

No publications were found for LOC100287355 Gene.

No data available for External Links for LOC100287355 Gene

Products for LOC100287355 Gene

Sources for LOC100287355 Gene