Aliases for LOC100133029 Gene

Aliases for LOC100133029 Gene

  • Sirtuin 5 Pseudogene 3

External Ids for LOC100133029 Gene

Previous GeneCards Identifiers for LOC100133029 Gene

  • GC01U901924
  • GC01P068184
  • GC01P068510

Summaries for LOC100133029 Gene

GeneCards Summary for LOC100133029 Gene

LOC100133029 (Sirtuin 5 Pseudogene) is a Pseudogene.

Additional gene information for LOC100133029 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100133029 Gene

Genomics for LOC100133029 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100133029 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J068023 Enhancer 0.4 Ensembl 0.4 -19.3 -19302 0.8 ATF7 ZFHX2 EGR2 ARL5AP3 DIRAS3 LOC100133029 RF01960-001 GNG12 GNG12-AS1
GH01J068022 Enhancer 0.4 FANTOM5 0.4 -20.6 -20649 0.1 ATF2 ZC3H11A ARL5AP3 DIRAS3 LOC100133029 RF01960-001 GNG12 GNG12-AS1
GH01J068012 Enhancer 0.3 Ensembl 0.3 -31.3 -31302 0.4 JUND RF01960-001 LOC100133029 DIRAS3 GNG12 GNG12-AS1
GH01J068011 Enhancer 0.2 Ensembl 0.3 -32.4 -32402 0.2 RF01960-001 LOC100133029 DIRAS3 GNG12 GNG12-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100133029 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the LOC100133029 gene promoter:
  • POU3F2 (N-Oct-5b)
  • STAT1
  • STAT1alpha
  • STAT1beta
  • STAT2
  • STAT3
  • STAT4
  • STAT5A
  • STAT5B
  • STAT6

Genomic Locations for LOC100133029 Gene

Genomic Locations for LOC100133029 Gene
chr1:68,043,303-68,044,273
(GRCh38/hg38)
Size:
971 bases
Orientation:
Plus strand
chr1:68,509,012-68,509,917
(GRCh37/hg19)
Size:
906 bases
Orientation:
Plus strand

Genomic View for LOC100133029 Gene

Genes around LOC100133029 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100133029 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100133029 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100133029 Gene

Proteins for LOC100133029 Gene

Post-translational modifications for LOC100133029 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100133029 Gene

Domains & Families for LOC100133029 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100133029 Gene

Function for LOC100133029 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100133029 Gene

Localization for LOC100133029 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100133029 Gene

Pathways & Interactions for LOC100133029 Gene

PathCards logo

SuperPathways for LOC100133029 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100133029 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100133029 Gene

Drugs & Compounds for LOC100133029 Gene

No Compound Related Data Available

Transcripts for LOC100133029 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100133029 Gene

No ASD Table

Relevant External Links for LOC100133029 Gene

GeneLoc Exon Structure for
LOC100133029

No data available for mRNA/cDNA for LOC100133029 Gene

Expression for LOC100133029 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100133029 Gene

genes like me logo Genes that share expression patterns with LOC100133029: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100133029 Gene

Orthologs for LOC100133029 Gene

No data available for Orthologs and Evolution for LOC100133029 Gene

Paralogs for LOC100133029 Gene

No data available for Paralogs for LOC100133029 Gene

Variants for LOC100133029 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100133029 Gene

Disorders for LOC100133029 Gene

No disorders were found for LOC100133029 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100133029 Gene

Publications for LOC100133029 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC100133029 Gene

Products for LOC100133029 Gene

Sources for LOC100133029 Gene