Aliases for LOC100132543 Gene

Aliases for LOC100132543 Gene

  • Family With Sequence Similarity 98 Member B Pseudogene 3

External Ids for LOC100132543 Gene

Previous GeneCards Identifiers for LOC100132543 Gene

  • GC12U900949
  • GC12P031997
  • GC12P032106
  • GC12P031955
  • GC12P031956
  • GC12P031969
  • GC12P031971
  • GC12P031975
  • GC12P031979
  • GC12P031957
  • GC12P031958
  • GC12P031960
  • GC12P031961
  • GC12P031962
  • GC12P031963
  • GC12P031965
  • GC12P031967

Summaries for LOC100132543 Gene

GeneCards Summary for LOC100132543 Gene

LOC100132543 (Family With Sequence Similarity 98 Member B Pseudogene) is a Pseudogene.

Additional gene information for LOC100132543 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100132543 Gene

Genomics for LOC100132543 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100132543 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J031953 Enhancer 0.6 Ensembl ENCODE 600.7 -0.7 -707 0.3 PKNOX1 GATA3 MEIS2 IKZF1 ENSG00000256987 LOC100132543 lnc-KIAA1551-2 lnc-KIAA1551-5 RESF1 LINC02422 H3-5
GH12J031954 Enhancer 0.2 Ensembl 600.7 -0.2 -152 0.6 ENSG00000256987 LOC100132543 lnc-KIAA1551-2 RESF1 LINC02422 lnc-KIAA1551-5 H3-5
GH12J031948 Enhancer 1 Ensembl ENCODE 0.7 -3.5 -3547 4.2 CREB1 GATAD2A ATF7 TFE3 SOX13 NFKBIZ RCOR2 RXRB NR2C1 IRF2 lnc-KIAA1551-5 DDX11 SINHCAF ENSG00000257511 LOC100132543 RPL12P32 RESF1 LINC02422 H3-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100132543 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100132543 Gene

Genomic Locations for LOC100132543 Gene
chr12:31,953,853-31,955,643
(GRCh38/hg38)
Size:
1,791 bases
Orientation:
Plus strand
chr12:32,106,787-32,108,577
(GRCh37/hg19)
Size:
1,791 bases
Orientation:
Plus strand

Genomic View for LOC100132543 Gene

Genes around LOC100132543 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100132543 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100132543 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100132543 Gene

Proteins for LOC100132543 Gene

Post-translational modifications for LOC100132543 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100132543 Gene

Domains & Families for LOC100132543 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100132543 Gene

Function for LOC100132543 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100132543 Gene

Localization for LOC100132543 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100132543 Gene

Pathways & Interactions for LOC100132543 Gene

PathCards logo

SuperPathways for LOC100132543 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100132543 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100132543 Gene

Drugs & Compounds for LOC100132543 Gene

No Compound Related Data Available

Transcripts for LOC100132543 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100132543 Gene

No ASD Table

Relevant External Links for LOC100132543 Gene

GeneLoc Exon Structure for
LOC100132543

No data available for mRNA/cDNA for LOC100132543 Gene

Expression for LOC100132543 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100132543 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100132543 Gene

This gene is overexpressed in Whole Blood (x10.9) and Liver (x4.1).
genes like me logo Genes that share expression patterns with LOC100132543: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100132543 Gene

Orthologs for LOC100132543 Gene

No data available for Orthologs and Evolution for LOC100132543 Gene

Paralogs for LOC100132543 Gene

No data available for Paralogs for LOC100132543 Gene

Variants for LOC100132543 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100132543 Gene

Disorders for LOC100132543 Gene

No disorders were found for LOC100132543 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100132543 Gene

Publications for LOC100132543 Gene

No publications were found for LOC100132543 Gene.

No data available for Mastermind for LOC100132543 Gene

Products for LOC100132543 Gene

Sources for LOC100132543 Gene