Aliases for LOC100132172 Gene

Aliases for LOC100132172 Gene

  • Histone Deacetylase 2 Pseudogene 3

External Ids for LOC100132172 Gene

Previous GeneCards Identifiers for LOC100132172 Gene

  • GC11U901014
  • GC11P113959
  • GC11P114453

Summaries for LOC100132172 Gene

GeneCards Summary for LOC100132172 Gene

LOC100132172 (Histone Deacetylase 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100132172 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100132172 Gene

Genomics for LOC100132172 Gene

GeneHancer (GH) Regulatory Elements Pubs


Top Transcription factor binding sites by QIAGEN in the LOC100132172 gene promoter:
  • AML1a
  • C/EBPalpha
  • E47
  • Evi-1
  • HEN1
  • Meis-1
  • Meis-1a
  • Meis-1b
  • SRF
  • SRF (504 AA)

Genomic Locations for LOC100132172 Gene

Latest Assembly
chr11:114,583,262-114,584,549
(GRCh38/hg38)
Size:
1,288 bases
Orientation:
Plus strand

Previous Assembly
chr11:114,453,984-114,455,271
(GRCh37/hg19 by Entrez Gene)
Size:
1,288 bases
Orientation:
Plus strand

Genomic View for LOC100132172 Gene

Genes around LOC100132172 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100132172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100132172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100132172 Gene

Proteins for LOC100132172 Gene

Post-translational modifications for LOC100132172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100132172 Gene

Domains & Families for LOC100132172 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100132172 Gene

Function for LOC100132172 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100132172 Gene

Localization for LOC100132172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100132172 Gene

Pathways & Interactions for LOC100132172 Gene

PathCards logo

SuperPathways for LOC100132172 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100132172 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100132172 Gene

Drugs & Compounds for LOC100132172 Gene

No Compound Related Data Available

Transcripts for LOC100132172 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100132172 Gene

No ASD Table

Relevant External Links for LOC100132172 Gene

GeneLoc Exon Structure for
LOC100132172

No data available for mRNA/cDNA for LOC100132172 Gene

Expression for LOC100132172 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100132172 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100132172 Gene

This gene is overexpressed in Colon - Transverse (x18.1).
genes like me logo Genes that share expression patterns with LOC100132172: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100132172 Gene

Orthologs for LOC100132172 Gene

No data available for Orthologs and Evolution for LOC100132172 Gene

Paralogs for LOC100132172 Gene

No data available for Paralogs for LOC100132172 Gene

Variants for LOC100132172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100132172 Gene

Disorders for LOC100132172 Gene

No disorders were found for LOC100132172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100132172 Gene

Publications for LOC100132172 Gene

No publications were found for LOC100132172 Gene.

No data available for Mastermind for LOC100132172 Gene

Products for LOC100132172 Gene

Sources for LOC100132172 Gene