Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC100131223 Gene

Aliases for LOC100131223 Gene

  • ADP Ribosylation Factor Like GTPase 8B Pseudogene 3
  • ADP-Ribosylation Factor-Like 8B Pseudogene 3

External Ids for LOC100131223 Gene

Previous GeneCards Identifiers for LOC100131223 Gene

  • GC01U901946
  • GC01M028321
  • GC01M028447

Summaries for LOC100131223 Gene

GeneCards Summary for LOC100131223 Gene

LOC100131223 (ADP Ribosylation Factor Like GTPase 8B Pseudogene) is a Pseudogene.

Additional gene information for LOC100131223 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100131223 Gene

Genomics for LOC100131223 Gene

GeneHancer (GH) Regulatory Elements for LOC100131223 Gene

Promoters and enhancers for LOC100131223 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J028123 Enhancer 0.4 Ensembl dbSUPER 550.7 -0.8 -839 0.2 LOC100131223 ENSG00000214812 PTAFR EYA3 ATP5IF1 DNAJC8 SCARNA1 RNU6-1245P PPP1R8 RNU6-176P
GH01J028122 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.2 -2168 1.7 PRDM10 ZNF311 SP1 CEBPB ZBTB17 ZFHX2 CEBPG IKZF1 ZNF521 ZNF121 PTAFR EYA3 DNAJC8 FGR ATP5IF1 PHACTR4 SESN2 THEMIS2 SCARNA1 RNU6-1245P
GH01J028125 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.2 -6168 4.5 SPI1 BCL6B MLLT1 PRDM1 IKZF1 RXRA FOSL2 IKZF2 CBFB ZSCAN4 PTAFR EYA3 DNAJC8 FGR ATP5IF1 PPP1R8 SCARNA1 RNU6-1245P THEMIS2 SESN2
GH01J028135 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.4 -14408 1.7 SPI1 MAFK ATF7 ZNF316 MCM7 TCF12 MAFG HDAC2 CREB1 CEBPB THEMIS2 ENSG00000270605 PTAFR XKR8 PHACTR4 MED18 SESN2 EYA3 STX12 FAM76A
GH01J028139 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -18.1 -18075 1 TRIM24 IKZF1 BACH1 ZNF316 NFE2 ZNF766 MAFG CTBP1 FOS MAFK PTAFR THEMIS2 SESN2 ENSG00000270605 EYA3 PHACTR4 STX12 MED18 XKR8 DNAJC8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100131223 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100131223 Gene

Genomic Locations for LOC100131223 Gene
chr1:28,120,835-28,121,462
(GRCh38/hg38)
Size:
628 bases
Orientation:
Minus strand
chr1:28,446,960-28,447,973
(GRCh37/hg19)
Size:
1,014 bases
Orientation:
Minus strand

Genomic View for LOC100131223 Gene

Genes around LOC100131223 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100131223 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100131223 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100131223 Gene

Proteins for LOC100131223 Gene

Post-translational modifications for LOC100131223 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100131223 Gene

Domains & Families for LOC100131223 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100131223 Gene

Function for LOC100131223 Gene

Phenotypes From GWAS Catalog for LOC100131223 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100131223 Gene

Localization for LOC100131223 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100131223 Gene

Pathways & Interactions for LOC100131223 Gene

SuperPathways for LOC100131223 Gene

No Data Available

Interacting Proteins for LOC100131223 Gene

Gene Ontology (GO) - Biological Process for LOC100131223 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100131223 Gene

Drugs & Compounds for LOC100131223 Gene

No Compound Related Data Available

Transcripts for LOC100131223 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100131223 Gene

No ASD Table

Relevant External Links for LOC100131223 Gene

GeneLoc Exon Structure for
LOC100131223

No data available for mRNA/cDNA for LOC100131223 Gene

Expression for LOC100131223 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100131223 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100131223 Gene

This gene is overexpressed in Whole Blood (x17.1), Testis (x13.2), and Brain - Spinal cord (cervical c-1) (x4.5).
genes like me logo Genes that share expression patterns with LOC100131223: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100131223 Gene

Orthologs for LOC100131223 Gene

No data available for Orthologs and Evolution for LOC100131223 Gene

Paralogs for LOC100131223 Gene

No data available for Paralogs for LOC100131223 Gene

Variants for LOC100131223 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100131223 Gene

Disorders for LOC100131223 Gene

No disorders were found for LOC100131223 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100131223 Gene

Publications for LOC100131223 Gene

No publications were found for LOC100131223 Gene.

Products for LOC100131223 Gene

Sources for LOC100131223 Gene

Content
Loading form....