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Aliases for LOC100131127 Gene

Aliases for LOC100131127 Gene

  • Delta 4-Desaturase, Sphingolipid 1 Pseudogene 3

External Ids for LOC100131127 Gene

Previous GeneCards Identifiers for LOC100131127 Gene

  • GC08U900850
  • GC08P028138
  • GC08P028083

Summaries for LOC100131127 Gene

GeneCards Summary for LOC100131127 Gene

LOC100131127 (Delta 4-Desaturase, Sphingolipid 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100131127 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100131127 Gene

Genomics for LOC100131127 Gene

GeneHancer (GH) Regulatory Elements for LOC100131127 Gene

Promoters and enhancers for LOC100131127 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J028189 Enhancer 1.1 Ensembl ENCODE 0.3 -34.9 -34918 4.4 CBFA2T2 TRIM24 SP7 CREM EGR1 SMARCA4 ZBED1 IKZF1 PKNOX1 DPF2 ELP3 LOC105379343 LOC100131127
GH08J028203 Enhancer 0.9 Ensembl ENCODE 0.3 -22.6 -22618 1 CBFA2T2 SMARCA4 DPF2 PRDM10 LEF1 HDAC1 SOX6 CTBP1 ZNF766 JUND ELP3 LOC105379343 LOC100131127
GH08J028183 Enhancer 1 Ensembl ENCODE 0.3 -42.0 -41966 1.1 SP7 PRDM1 MZF1 ZBTB8A ZNF600 PRDM10 ZIC2 ZEB2 ZNF629 ZNF692 LOC105379343 ELP3 CLU GC08P028181 LOC100131127
GH08J028198 Enhancer 0.8 Ensembl ENCODE 0.3 -26.7 -26723 1.4 ZNF121 TARDBP CTBP1 PKNOX1 ZNF217 DPF2 GATAD2B BCOR RCOR1 FOS ELP3 LOC105379343 LOC100131127
GH08J028185 Enhancer 0.9 Ensembl ENCODE 0.3 -40.3 -40318 0.8 SP7 ZBTB8A ZIC2 POLR2A ZNF561 NRF1 EGR1 OSR2 RUNX3 ZNF189 ELP3 LOC105379343 LOC100131127
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100131127 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100131127 Gene

Genomic Locations for LOC100131127 Gene
chr8:28,225,919-28,227,559
(GRCh38/hg38)
Size:
1,641 bases
Orientation:
Plus strand
chr8:28,083,436-28,085,079
(GRCh37/hg19)
Size:
1,644 bases
Orientation:
Plus strand

Genomic View for LOC100131127 Gene

Genes around LOC100131127 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100131127 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100131127 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100131127 Gene

Proteins for LOC100131127 Gene

Post-translational modifications for LOC100131127 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100131127 Gene

Domains & Families for LOC100131127 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100131127 Gene

Function for LOC100131127 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100131127 Gene

Localization for LOC100131127 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100131127 Gene

Pathways & Interactions for LOC100131127 Gene

PathCards logo

SuperPathways for LOC100131127 Gene

No Data Available

Interacting Proteins for LOC100131127 Gene

Gene Ontology (GO) - Biological Process for LOC100131127 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100131127 Gene

Drugs & Compounds for LOC100131127 Gene

No Compound Related Data Available

Transcripts for LOC100131127 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100131127 Gene

No ASD Table

Relevant External Links for LOC100131127 Gene

GeneLoc Exon Structure for
LOC100131127

No data available for mRNA/cDNA for LOC100131127 Gene

Expression for LOC100131127 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100131127 Gene

genes like me logo Genes that share expression patterns with LOC100131127: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100131127 Gene

Orthologs for LOC100131127 Gene

No data available for Orthologs and Evolution for LOC100131127 Gene

Paralogs for LOC100131127 Gene

No data available for Paralogs for LOC100131127 Gene

Variants for LOC100131127 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100131127 Gene

Disorders for LOC100131127 Gene

No disorders were found for LOC100131127 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100131127 Gene

Publications for LOC100131127 Gene

No publications were found for LOC100131127 Gene.

No data available for External Links for LOC100131127 Gene

Products for LOC100131127 Gene

Sources for LOC100131127 Gene

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