Aliases for LOC100131107 Gene

Aliases for LOC100131107 Gene

  • Putative UPF0607 Protein ENSP00000383783 3 5
  • UPF0607 Protein ENSP00000383783-Like 3
  • AL591893.1 5

External Ids for LOC100131107 Gene

Previous GeneCards Identifiers for LOC100131107 Gene

  • GC01M150319
  • GC01M123429

Summaries for LOC100131107 Gene

GeneCards Summary for LOC100131107 Gene

LOC100131107 (Putative UPF0607 Protein ENSP00000383783) is a Protein Coding gene.

Additional gene information for LOC100131107 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100131107 Gene

Genomics for LOC100131107 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100131107 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J152045 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +32.3 32320 6.6 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF YBX1 PRDM10 ZNF629 LEF1 S100A11 LOC101927949 PI4KB FLG-AS1 GABPB2 PIP5K1A ZNF687 MRPL9 ENSG00000229021 RN7SL444P
GH01J152070 Enhancer 0.8 ENCODE 0.4 +9.5 9519 0.9 CREB1 IKZF1 JUND PKNOX1 DPF2 HDAC1 SOX6 MGA CBX3 ZNF766 piR-38051-012 S100A11 TCHH ENSG00000226716 PUDPP2 FLG SPTLC1P4 LOC100131107
GH01J152052 Enhancer 0.9 ENCODE dbSUPER 0.3 +28.2 28184 0.2 CEBPG CTCF YBX1 JUND FOXA1 ZNF143 REST RAD21 TRIM22 CEBPA LOC101927949 S100A11 HSALNG0007215 LOC100131107
GH01J152067 Enhancer 0.3 Ensembl 0.4 +12.6 12623 1.8 USF1 SPI1 HSALNG0007215 piR-38051-012 S100A11 TCHH ENSG00000226716 TCHHL1 PUDPP2 HRNR FLG LOC100131107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100131107 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for LOC100131107

Top Transcription factor binding sites by QIAGEN in the LOC100131107 gene promoter:
  • AREB6
  • HSF1 (long)
  • HSF1short
  • Nkx3-1
  • Nkx3-1 v1
  • Nkx3-1 v2
  • Nkx3-1 v3
  • Nkx3-1 v4
  • POU2F1b
  • POU2F1c

Genomic Locations for LOC100131107 Gene

Genomic Locations for LOC100131107 Gene
chr1:152,079,413-152,080,924
(GRCh38/hg38)
Size:
1,512 bases
Orientation:
Minus strand
chr1:152,052,033-152,053,058
(GRCh37/hg19)
Size:
1,026 bases
Orientation:
Minus strand

Genomic View for LOC100131107 Gene

Genes around LOC100131107 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100131107 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100131107 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100131107 Gene

Proteins for LOC100131107 Gene

Post-translational modifications for LOC100131107 Gene

No Post-translational modifications

Other Protein References for LOC100131107 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC100131107 Gene

Domains & Families for LOC100131107 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100131107 Gene

Function for LOC100131107 Gene

Phenotypes From GWAS Catalog for LOC100131107 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100131107 Gene

Localization for LOC100131107 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100131107 Gene

Pathways & Interactions for LOC100131107 Gene

PathCards logo

SuperPathways for LOC100131107 Gene

No Data Available

Interacting Proteins for LOC100131107 Gene

Gene Ontology (GO) - Biological Process for LOC100131107 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100131107 Gene

Drugs & Compounds for LOC100131107 Gene

No Compound Related Data Available

Transcripts for LOC100131107 Gene

mRNA/cDNA for LOC100131107 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100131107 Gene

No ASD Table

Relevant External Links for LOC100131107 Gene

GeneLoc Exon Structure for
LOC100131107

Expression for LOC100131107 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100131107

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100131107 Gene

Orthologs for LOC100131107 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LOC100131107 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia LOC469490 30
  • 98.64 (n)
Species where no ortholog for LOC100131107 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for LOC100131107 Gene

ENSEMBL:
Gene Tree for LOC100131107 (if available)
TreeFam:
Gene Tree for LOC100131107 (if available)

Paralogs for LOC100131107 Gene

No data available for Paralogs for LOC100131107 Gene

Variants for LOC100131107 Gene

Additional dbSNP identifiers (rs#s) for LOC100131107 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100131107 Gene

Disorders for LOC100131107 Gene

No disorders were found for LOC100131107 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100131107 Gene

Publications for LOC100131107 Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3

No data available for Mastermind for LOC100131107 Gene

Products for LOC100131107 Gene

Sources for LOC100131107 Gene