Aliases for LOC100130394 Gene

Aliases for LOC100130394 Gene

  • Translation Machinery Associated 7 Homolog (S. Cerevisiae) Pseudogene 3
  • Translational Machinery Associated 7 Homolog Pseudogene 3
  • CCDC72 Pseudogene 3

External Ids for LOC100130394 Gene

Previous GeneCards Identifiers for LOC100130394 Gene

  • GC05U900838
  • GC05M172015
  • GC05M172086
  • GC05M172089
  • GC05M172092

Summaries for LOC100130394 Gene

GeneCards Summary for LOC100130394 Gene

LOC100130394 (Translation Machinery Associated 7 Homolog (S. Cerevisiae) Pseudogene) is a Pseudogene.

Additional gene information for LOC100130394 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100130394 Gene

Genomics for LOC100130394 Gene

GeneHancer (GH) Regulatory Elements for LOC100130394 Gene

Promoters and enhancers for LOC100130394 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J172656 Promoter/Enhancer 0.8 EPDnew Ensembl dbSUPER 500.7 +0.1 133 0.4 ENSG00000253683 LOC100130394 lnc-ERGIC1-5 lnc-DUSP1-6 piR-31462-027 UBTD2 ENSG00000254295 RPL26L1 ENSG00000204758 NEURL1B
GH05J172654 Enhancer 0.3 Ensembl dbSUPER 500.7 +1.5 1533 0.4 ENSG00000253683 LOC100130394 lnc-DUSP1-6 ENSG00000254295 RPL26L1 ENSG00000204758 piR-32813-014 NEURL1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100130394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100130394 Gene

Genomic Locations for LOC100130394 Gene
chr5:172,656,359-172,656,734
(GRCh38/hg38)
Size:
376 bases
Orientation:
Minus strand
chr5:172,083,362-172,083,737
(GRCh37/hg19)
Size:
376 bases
Orientation:
Minus strand

Genomic View for LOC100130394 Gene

Genes around LOC100130394 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130394 Gene

Proteins for LOC100130394 Gene

Post-translational modifications for LOC100130394 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130394 Gene

Domains & Families for LOC100130394 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100130394 Gene

Function for LOC100130394 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130394 Gene

Localization for LOC100130394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130394 Gene

Pathways & Interactions for LOC100130394 Gene

PathCards logo

SuperPathways for LOC100130394 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100130394 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100130394 Gene

Drugs & Compounds for LOC100130394 Gene

No Compound Related Data Available

Transcripts for LOC100130394 Gene

mRNA/cDNA for LOC100130394 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130394 Gene

No ASD Table

Relevant External Links for LOC100130394 Gene

GeneLoc Exon Structure for
LOC100130394

Expression for LOC100130394 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100130394 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100130394

genes like me logo Genes that share expression patterns with LOC100130394: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130394 Gene

Orthologs for LOC100130394 Gene

No data available for Orthologs and Evolution for LOC100130394 Gene

Paralogs for LOC100130394 Gene

No data available for Paralogs for LOC100130394 Gene

Variants for LOC100130394 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130394 Gene

Disorders for LOC100130394 Gene

No disorders were found for LOC100130394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100130394 Gene

Publications for LOC100130394 Gene

No publications were found for LOC100130394 Gene.

No data available for Mastermind for LOC100130394 Gene

Products for LOC100130394 Gene

Sources for LOC100130394 Gene