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Aliases for LOC100130394 Gene

Aliases for LOC100130394 Gene

  • Translation Machinery Associated 7 Homolog (S. Cerevisiae) Pseudogene 3
  • AC027309.2 5

External Ids for LOC100130394 Gene

Previous GeneCards Identifiers for LOC100130394 Gene

  • GC05U900838
  • GC05M172015
  • GC05M172086
  • GC05M172089
  • GC05M172092

Summaries for LOC100130394 Gene

GeneCards Summary for LOC100130394 Gene

LOC100130394 (Translation Machinery Associated 7 Homolog (S. Cerevisiae) Pseudogene) is a Pseudogene.

Additional gene information for LOC100130394 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100130394 Gene

Genomics for LOC100130394 Gene

GeneHancer (GH) Regulatory Elements for LOC100130394 Gene

Promoters and enhancers for LOC100130394 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I172654 Enhancer 0.3 dbSUPER 550.8 +1.4 1363 0.9 SETDB1 GC05M172660 LOC100130394 GC05M172657 ENSG00000254295 RPL26L1 LOC100268168 NEURL1B
GH05I172656 Enhancer 0.2 dbSUPER 550.8 -0.2 -245 0.9 GC05M172658 GC05P172658 LOC100130394 GC05M172660 GC05M172657 ENSG00000254295 RPL26L1 LOC100268168 NEURL1B
GH05I172763 Promoter/Enhancer 3.1 VISTA EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.2 -115.5 -115465 16.8 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 SP3 DUSP1 CREBRF BOD1 ERGIC1 SH3PXD2B LOC100268168 LOC100130394 LOC401218 UBTD2 LOC105377730
GH05I172280 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.1 +373.7 373654 5 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 UBTD2 EFCAB9 ENSG00000212529 LOC100130394 LOC100268168 KLF3P1
GH05I172787 Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -139.0 -139008 16.6 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B YBX1 ZBTB7B IRF4 YY1 CREBRF ERGIC1 BOD1 SH3PXD2B DUSP1 FBXW11 LOC105377730 LOC401218 CDC42P5 LOC100130394
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100130394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100130394 Gene

Genomic Locations for LOC100130394 Gene
chr5:172,656,359-172,656,734
(GRCh38/hg38)
Size:
376 bases
Orientation:
Minus strand
chr5:172,083,362-172,083,737
(GRCh37/hg19)

Genomic View for LOC100130394 Gene

Genes around LOC100130394 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130394 Gene

Proteins for LOC100130394 Gene

Post-translational modifications for LOC100130394 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130394 Gene

Domains & Families for LOC100130394 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100130394 Gene

Function for LOC100130394 Gene

Phenotypes From GWAS Catalog for LOC100130394 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130394 Gene

Localization for LOC100130394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130394 Gene

Pathways & Interactions for LOC100130394 Gene

SuperPathways for LOC100130394 Gene

No Data Available

Interacting Proteins for LOC100130394 Gene

Gene Ontology (GO) - Biological Process for LOC100130394 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100130394 Gene

Drugs & Compounds for LOC100130394 Gene

No Compound Related Data Available

Transcripts for LOC100130394 Gene

mRNA/cDNA for LOC100130394 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130394 Gene

No ASD Table

Relevant External Links for LOC100130394 Gene

GeneLoc Exon Structure for
LOC100130394

Expression for LOC100130394 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100130394 Gene

genes like me logo Genes that share expression patterns with LOC100130394: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130394 Gene

Orthologs for LOC100130394 Gene

Evolution for LOC100130394 Gene

ENSEMBL:
Gene Tree for LOC100130394 (if available)
TreeFam:
Gene Tree for LOC100130394 (if available)

No data available for Orthologs for LOC100130394 Gene

Paralogs for LOC100130394 Gene

No data available for Paralogs for LOC100130394 Gene

Variants for LOC100130394 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130394 Gene

Disorders for LOC100130394 Gene

Additional Disease Information for LOC100130394

No disorders were found for LOC100130394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100130394 Gene

Publications for LOC100130394 Gene

No publications were found for LOC100130394 Gene.

Products for LOC100130394 Gene

Sources for LOC100130394 Gene

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