Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC100130268 Gene

Subcategory (RNA class) for LOC100130268 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC100130268 Gene

  • Uncharacterized LOC100130268 3
  • AC091534.1 5

External Ids for LOC100130268 Gene

Previous GeneCards Identifiers for LOC100130268 Gene

  • GC12U900913
  • GC12P073915

Summaries for LOC100130268 Gene

GeneCards Summary for LOC100130268 Gene

LOC100130268 (Uncharacterized LOC100130268) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100130268 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100130268 Gene

Genomics for LOC100130268 Gene

GeneHancer (GH) Regulatory Elements for LOC100130268 Gene

Promoters and enhancers for LOC100130268 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J075236 Enhancer 0.6 ENCODE 650.7 +1.6 1572 0.2 SMARCE1 PKNOX1 NFIB DPF2 ELF1 FOXA1 ZNF507 ZNF217 CTBP1 GATA3 LOC100130268 CCNG2P1
GH12J075270 Enhancer 0.2 ENCODE 0.3 +35.6 35592 0.2 GLIPR1L2 KCNC2 CCNG2P1 LOC100130268 LOC100419702 CAPS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100130268 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100130268 Gene

Genomic Locations for LOC100130268 Gene
chr12:75,234,724-75,298,661
(GRCh38/hg38)
Size:
63,938 bases
Orientation:
Plus strand

Genomic View for LOC100130268 Gene

Genes around LOC100130268 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130268 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130268 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130268 Gene

Proteins for LOC100130268 Gene

Post-translational modifications for LOC100130268 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130268 Gene

Domains & Families for LOC100130268 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100130268 Gene

Function for LOC100130268 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130268 Gene

Localization for LOC100130268 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130268 Gene

Pathways & Interactions for LOC100130268 Gene

SuperPathways for LOC100130268 Gene

No Data Available

Interacting Proteins for LOC100130268 Gene

Gene Ontology (GO) - Biological Process for LOC100130268 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100130268 Gene

Drugs & Compounds for LOC100130268 Gene

No Compound Related Data Available

Transcripts for LOC100130268 Gene

mRNA/cDNA for LOC100130268 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130268 Gene

No ASD Table

Relevant External Links for LOC100130268 Gene

GeneLoc Exon Structure for
LOC100130268

Expression for LOC100130268 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130268 Gene

Orthologs for LOC100130268 Gene

Evolution for LOC100130268 Gene

ENSEMBL:
Gene Tree for LOC100130268 (if available)
TreeFam:
Gene Tree for LOC100130268 (if available)

No data available for Orthologs for LOC100130268 Gene

Paralogs for LOC100130268 Gene

No data available for Paralogs for LOC100130268 Gene

Variants for LOC100130268 Gene

Sequence variations from dbSNP and Humsavar for LOC100130268 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000087681 -- 75,248,108(+) C/T intron_variant
rs1000113623 -- 75,248,394(+) G/A intron_variant
rs1000148500 -- 75,242,296(+) A/C intron_variant
rs1000326561 -- 75,245,250(+) A/C/T intron_variant
rs1000393715 -- 75,234,030(+) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130268 Gene

Disorders for LOC100130268 Gene

Additional Disease Information for LOC100130268

No disorders were found for LOC100130268 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100130268 Gene

Publications for LOC100130268 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC100130268 Gene

Sources for LOC100130268 Gene

Content
Loading form....