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Aliases for LOC100130256 Gene

Subcategory (RNA class) for LOC100130256 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC100130256 Gene

  • Uncharacterized LOC100130256 3
  • AC007277.1 5

External Ids for LOC100130256 Gene

Previous GeneCards Identifiers for LOC100130256 Gene

  • GC02U901442

Summaries for LOC100130256 Gene

GeneCards Summary for LOC100130256 Gene

LOC100130256 (Uncharacterized LOC100130256) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100130256 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100130256 Gene

Genomics for LOC100130256 Gene

GeneHancer (GH) Regulatory Elements for LOC100130256 Gene

Promoters and enhancers for LOC100130256 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I170695 Enhancer 0.5 ENCODE 550.8 0.0 -12 0.2 ZNF335 GLIS1 FEZF1 ZIC2 LOC100130256 GC02M170693
GH02I170679 Enhancer 1.1 UCNEbase ENCODE 0.4 +14.7 14744 2.1 MEIS2 FOXA2 SMAD1 NFIB ZNF133 YY1 LCORL ZSCAN5C ATF7 PRDM10 GC02M170671 ENSG00000275414 LOC100130256
GH02I170651 Enhancer 1 UCNEbase ENCODE 0.3 +43.3 43341 0.4 MEIS2 LEF1 L3MBTL2 TAL1 CBFA2T3 TCF12 ZNF148 CBFA2T2 MYC MGA GC02M170671 GC02M170619 LOC100130256 MYO3B
GH02I170687 Enhancer 0.2 FANTOM5 0.4 +7.6 7641 0.4 ENSG00000275414 LOC100130256 GC02M170671
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100130256 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100130256 Gene

Genomic Locations for LOC100130256 Gene
chr2:170,619,392-170,695,374
(GRCh38/hg38)
Size:
75,983 bases
Orientation:
Minus strand
chr2:171,475,138-171,551,884
(GRCh37/hg19)

Genomic View for LOC100130256 Gene

Genes around LOC100130256 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130256 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130256 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130256 Gene

Proteins for LOC100130256 Gene

Post-translational modifications for LOC100130256 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130256 Gene

Domains & Families for LOC100130256 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100130256 Gene

Function for LOC100130256 Gene

Phenotypes From GWAS Catalog for LOC100130256 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130256 Gene

Localization for LOC100130256 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130256 Gene

Pathways & Interactions for LOC100130256 Gene

SuperPathways for LOC100130256 Gene

No Data Available

Interacting Proteins for LOC100130256 Gene

Gene Ontology (GO) - Biological Process for LOC100130256 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100130256 Gene

Drugs & Compounds for LOC100130256 Gene

No Compound Related Data Available

Transcripts for LOC100130256 Gene

mRNA/cDNA for LOC100130256 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100130256 Gene

Uncharacterized LOC100130256:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130256 Gene

No ASD Table

Relevant External Links for LOC100130256 Gene

GeneLoc Exon Structure for
LOC100130256

Expression for LOC100130256 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100130256 Gene

SOURCE GeneReport for Unigene cluster for LOC100130256 Gene:

Hs.683783
genes like me logo Genes that share expression patterns with LOC100130256: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130256 Gene

Orthologs for LOC100130256 Gene

Evolution for LOC100130256 Gene

ENSEMBL:
Gene Tree for LOC100130256 (if available)
TreeFam:
Gene Tree for LOC100130256 (if available)

No data available for Orthologs for LOC100130256 Gene

Paralogs for LOC100130256 Gene

No data available for Paralogs for LOC100130256 Gene

Variants for LOC100130256 Gene

Sequence variations from dbSNP and Humsavar for LOC100130256 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000004576 -- 170,620,909(-) G/C intron_variant
rs1000019606 -- 170,650,403(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000085391 -- 170,654,337(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000168649 -- 170,632,346(-) A/C intron_variant
rs1000201813 -- 170,656,735(-) C/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130256 Gene

Disorders for LOC100130256 Gene

Additional Disease Information for LOC100130256

No disorders were found for LOC100130256 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100130256 Gene

Publications for LOC100130256 Gene

No publications were found for LOC100130256 Gene.

Products for LOC100130256 Gene

Sources for LOC100130256 Gene

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