Aliases for LOC100130075 Gene

Aliases for LOC100130075 Gene

  • SUZ RNA Binding Domain Containing 1 Pseudogene 3
  • UPF0485 Protein C1orf144 Homolog 3

External Ids for LOC100130075 Gene

Previous GeneCards Identifiers for LOC100130075 Gene

  • GC12U900990
  • GC12M067485
  • GC12M069198

Summaries for LOC100130075 Gene

GeneCards Summary for LOC100130075 Gene

LOC100130075 (SUZ RNA Binding Domain Containing 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100130075 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100130075 Gene

Genomics for LOC100130075 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100130075 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J068803 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.7 -2.9 -2899 10.4 SP1 HNRNPL CREB1 GATAD2A CTCF ZBTB33 PRDM10 ZNF629 REST TFE3 MDM2 NONHSAG011624.2 NUP107 CPSF6 KRT8P39 RPL10P12 SLC35E3 RAP1B ATP5PDP4 ENSG00000256678
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100130075 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100130075 Gene

Genomic Locations for LOC100130075 Gene
chr12:68,804,437-68,805,494
(GRCh38/hg38)
Size:
1,058 bases
Orientation:
Minus strand
chr12:69,198,784-69,199,259
(GRCh37/hg19)
Size:
476 bases
Orientation:
Minus strand

Genomic View for LOC100130075 Gene

Genes around LOC100130075 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130075 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130075 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130075 Gene

Proteins for LOC100130075 Gene

Post-translational modifications for LOC100130075 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130075 Gene

Domains & Families for LOC100130075 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100130075 Gene

Function for LOC100130075 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130075 Gene

Localization for LOC100130075 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130075 Gene

Pathways & Interactions for LOC100130075 Gene

PathCards logo

SuperPathways for LOC100130075 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100130075 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100130075 Gene

Drugs & Compounds for LOC100130075 Gene

No Compound Related Data Available

Transcripts for LOC100130075 Gene

mRNA/cDNA for LOC100130075 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130075 Gene

No ASD Table

Relevant External Links for LOC100130075 Gene

GeneLoc Exon Structure for
LOC100130075

Expression for LOC100130075 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100130075 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100130075 Gene

This gene is overexpressed in Liver (x21.3) and Testis (x10.2).

SOURCE GeneReport for Unigene cluster for LOC100130075 Gene:

Hs.744781
genes like me logo Genes that share expression patterns with LOC100130075: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130075 Gene

Orthologs for LOC100130075 Gene

No data available for Orthologs and Evolution for LOC100130075 Gene

Paralogs for LOC100130075 Gene

No data available for Paralogs for LOC100130075 Gene

Variants for LOC100130075 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130075 Gene

Disorders for LOC100130075 Gene

No disorders were found for LOC100130075 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100130075 Gene

Publications for LOC100130075 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for LOC100130075 Gene

Products for LOC100130075 Gene

Sources for LOC100130075 Gene