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Aliases for LOC100130044 Gene

Aliases for LOC100130044 Gene

  • Cilia And Flagella Associated Protein 69 Pseudogene 3
  • AC023825.1 5

External Ids for LOC100130044 Gene

Previous GeneCards Identifiers for LOC100130044 Gene

  • GC16U900837
  • GC16M055580

Summaries for LOC100130044 Gene

GeneCards Summary for LOC100130044 Gene

LOC100130044 (Cilia And Flagella Associated Protein 69 Pseudogene) is a Pseudogene.

Additional gene information for LOC100130044 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100130044 Gene

Genomics for LOC100130044 Gene

GeneHancer (GH) Regulatory Elements for LOC100130044 Gene

Promoters and enhancers for LOC100130044 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I057013 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.5 -474 3.2 HDGF PKNOX1 MAX EBF1 BATF IRF4 RAD21 E4F1 RELA ATF7 GC16M057013 LOC100130044 NLRC5 HERPUD1 GC16P057038
GH16I057016 Promoter/Enhancer 1.2 EPDnew ENCODE dbSUPER 10.2 -3.4 -3402 1.1 SMARCA5 BCOR JUN ZMYM3 KDM1A MNT NLRC5 LOC100130044 GC16P057038
GH16I057035 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 6.5 -25.4 -25418 8.5 HDGF SMAD1 RB1 ZNF133 BMI1 YBX1 BATF KLF5 IRF4 ZNF143 GC16P057038 NLRC5 CETP LOC100130044 MT1E FAM192A GC16P057053
GH16I057019 Enhancer 0.4 dbSUPER 8.5 -5.9 -5919 1.3 GATAD2A SAP130 SCRT2 NLRC5 LOC100130044 GC16P057038
GH16I057022 Enhancer 0.6 ENCODE dbSUPER 0.4 -9.6 -9564 2.1 EBF1 RUNX3 NLRC5 LOC100130044 GC16P057038
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100130044 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100130044 Gene

Genomic Locations for LOC100130044 Gene
chr16:57,013,054-57,014,113
(GRCh38/hg38)
Size:
1,060 bases
Orientation:
Minus strand
chr16:57,046,983-57,048,012
(GRCh37/hg19)

Genomic View for LOC100130044 Gene

Genes around LOC100130044 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130044 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130044 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130044 Gene

Proteins for LOC100130044 Gene

Post-translational modifications for LOC100130044 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130044 Gene

Domains & Families for LOC100130044 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100130044 Gene

Function for LOC100130044 Gene

Phenotypes From GWAS Catalog for LOC100130044 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130044 Gene

Localization for LOC100130044 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130044 Gene

Pathways & Interactions for LOC100130044 Gene

SuperPathways for LOC100130044 Gene

No Data Available

Interacting Proteins for LOC100130044 Gene

Gene Ontology (GO) - Biological Process for LOC100130044 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100130044 Gene

Drugs & Compounds for LOC100130044 Gene

No Compound Related Data Available

Transcripts for LOC100130044 Gene

mRNA/cDNA for LOC100130044 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130044 Gene

No ASD Table

Relevant External Links for LOC100130044 Gene

GeneLoc Exon Structure for
LOC100130044

Expression for LOC100130044 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100130044 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100130044 Gene

This gene is overexpressed in Whole Blood (x22.5) and Spleen (x7.1).
genes like me logo Genes that share expression patterns with LOC100130044: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130044 Gene

Orthologs for LOC100130044 Gene

Evolution for LOC100130044 Gene

ENSEMBL:
Gene Tree for LOC100130044 (if available)
TreeFam:
Gene Tree for LOC100130044 (if available)

No data available for Orthologs for LOC100130044 Gene

Paralogs for LOC100130044 Gene

No data available for Paralogs for LOC100130044 Gene

Variants for LOC100130044 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130044 Gene

Disorders for LOC100130044 Gene

No disorders were found for LOC100130044 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100130044 Gene

Publications for LOC100130044 Gene

No publications were found for LOC100130044 Gene.

Products for LOC100130044 Gene

Sources for LOC100130044 Gene

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