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Aliases for LOC100130018 Gene

Aliases for LOC100130018 Gene

  • Prostaglandin Reductase 1 Pseudogene 3
  • AC242426.1 5

External Ids for LOC100130018 Gene

Previous GeneCards Identifiers for LOC100130018 Gene

  • GC01U901814
  • GC01P145258
  • GC01P146792

Summaries for LOC100130018 Gene

GeneCards Summary for LOC100130018 Gene

LOC100130018 (Prostaglandin Reductase 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100130018 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100130018 Gene

Genomics for LOC100130018 Gene

GeneHancer (GH) Regulatory Elements for LOC100130018 Gene

Promoters and enhancers for LOC100130018 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I147336 Enhancer 0.5 ENCODE 0.4 +17.8 17815 1.2 SP1 RFX1 POU5F1 PRDM10 BMI1 PFN1P8 LOC100130018 GC01P147408 LINC00624
GH01I147377 Enhancer 0.9 ENCODE 0.2 +58.9 58908 1.7 PKNOX1 SMAD1 ATF1 ARNT TCF12 ZNF766 GATA2 CAVIN1 NCOA1 REST ENSG00000237188 CHD1L GC01P147408 LOC100130018 LINC00624
GH01I147390 Enhancer 0.8 ENCODE 0.2 +71.0 71036 0.2 HDGF PKNOX1 NEUROD1 RAD21 ELK1 ARID2 SCRT2 ZNF207 ZNF143 MIXL1 GPR89B GC01P147408 LOC100130018 LINC00624
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100130018 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100130018 Gene

Genomic Locations for LOC100130018 Gene
chr1:147,319,082-147,320,377
(GRCh38/hg38)
Size:
1,296 bases
Orientation:
Plus strand
chr1:146,790,758-146,792,095
(GRCh37/hg19)

Genomic View for LOC100130018 Gene

Genes around LOC100130018 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100130018 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100130018 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100130018 Gene

Proteins for LOC100130018 Gene

Post-translational modifications for LOC100130018 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100130018 Gene

Domains & Families for LOC100130018 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100130018 Gene

Function for LOC100130018 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100130018 Gene

Localization for LOC100130018 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100130018 Gene

Pathways & Interactions for LOC100130018 Gene

SuperPathways for LOC100130018 Gene

No Data Available

Interacting Proteins for LOC100130018 Gene

Gene Ontology (GO) - Biological Process for LOC100130018 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100130018 Gene

Drugs & Compounds for LOC100130018 Gene

No Compound Related Data Available

Transcripts for LOC100130018 Gene

mRNA/cDNA for LOC100130018 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100130018 Gene

No ASD Table

Relevant External Links for LOC100130018 Gene

GeneLoc Exon Structure for
LOC100130018

Expression for LOC100130018 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100130018 Gene

genes like me logo Genes that share expression patterns with LOC100130018: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100130018 Gene

Orthologs for LOC100130018 Gene

Evolution for LOC100130018 Gene

ENSEMBL:
Gene Tree for LOC100130018 (if available)
TreeFam:
Gene Tree for LOC100130018 (if available)

No data available for Orthologs for LOC100130018 Gene

Paralogs for LOC100130018 Gene

No data available for Paralogs for LOC100130018 Gene

Variants for LOC100130018 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100130018 Gene

Disorders for LOC100130018 Gene

No disorders were found for LOC100130018 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100130018 Gene

Publications for LOC100130018 Gene

No publications were found for LOC100130018 Gene.

Products for LOC100130018 Gene

Sources for LOC100130018 Gene

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