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Aliases for LOC100129948 Gene

Aliases for LOC100129948 Gene

  • Riboflavin Kinase Pseudogene 3
  • AL590648.1 5

External Ids for LOC100129948 Gene

Previous GeneCards Identifiers for LOC100129948 Gene

  • GC01U902019
  • GC01P210888
  • GC01P212821

Summaries for LOC100129948 Gene

GeneCards Summary for LOC100129948 Gene

LOC100129948 (Riboflavin Kinase Pseudogene) is a Pseudogene.

Additional gene information for LOC100129948 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129948 Gene

Genomics for LOC100129948 Gene

GeneHancer (GH) Regulatory Elements for LOC100129948 Gene

Promoters and enhancers for LOC100129948 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J212644 Enhancer 0.8 ENCODE dbSUPER 650.7 -1.7 -1688 1.5 SCRT1 SOX5 ATF1 CEBPB MAFG CEBPG ZNF395 ZNF316 SCRT2 NFE2 LOC100129948 GC01P212648 BATF3 ENSG00000235862 LOC102723761
GH01J212634 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.9 -9897 5.7 SMAD1 ATF1 ARNT FEZF1 TCF12 ZNF766 GLIS2 GATA2 FOS ATF7 ATF3 BATF3 RPS6KC1 FLVCR1-DT TATDN3 PPP2R5A VASH2 LOC100129948 ENSG00000235862 LOC102723761
GH01J212629 Enhancer 0.9 ENCODE dbSUPER 0.4 -17.1 -17118 0.9 HDGF CTCF MAX BACH1 EBF1 ZIC2 RAD21 RELA CTBP1 POLR2A ENSG00000235862 LOC100129948
GH01J212631 Enhancer 0.5 dbSUPER 0.4 -14.7 -14717 1.1 L3MBTL2 NFRKB ZNF512 VEZF1 FLVCR1 ENSG00000235862 LOC100129948 LOC102723761
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129948 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129948 Gene

Genomic Locations for LOC100129948 Gene
chr1:212,647,270-212,650,326
(GRCh38/hg38)
Size:
3,057 bases
Orientation:
Plus strand
chr1:212,820,612-212,823,668
(GRCh37/hg19)
Size:
3,057 bases
Orientation:
Plus strand

Genomic View for LOC100129948 Gene

Genes around LOC100129948 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129948 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129948 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129948 Gene

Proteins for LOC100129948 Gene

Post-translational modifications for LOC100129948 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129948 Gene

Domains & Families for LOC100129948 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129948 Gene

Function for LOC100129948 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129948 Gene

Localization for LOC100129948 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129948 Gene

Pathways & Interactions for LOC100129948 Gene

SuperPathways for LOC100129948 Gene

No Data Available

Interacting Proteins for LOC100129948 Gene

Gene Ontology (GO) - Biological Process for LOC100129948 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129948 Gene

Drugs & Compounds for LOC100129948 Gene

No Compound Related Data Available

Transcripts for LOC100129948 Gene

mRNA/cDNA for LOC100129948 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129948 Gene

No ASD Table

Relevant External Links for LOC100129948 Gene

GeneLoc Exon Structure for
LOC100129948

Expression for LOC100129948 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129948 Gene

genes like me logo Genes that share expression patterns with LOC100129948: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129948 Gene

Orthologs for LOC100129948 Gene

Evolution for LOC100129948 Gene

ENSEMBL:
Gene Tree for LOC100129948 (if available)
TreeFam:
Gene Tree for LOC100129948 (if available)

No data available for Orthologs for LOC100129948 Gene

Paralogs for LOC100129948 Gene

No data available for Paralogs for LOC100129948 Gene

Variants for LOC100129948 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129948 Gene

Disorders for LOC100129948 Gene

No disorders were found for LOC100129948 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129948 Gene

Publications for LOC100129948 Gene

No publications were found for LOC100129948 Gene.

Products for LOC100129948 Gene

Sources for LOC100129948 Gene

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