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Aliases for LOC100129935 Gene

Aliases for LOC100129935 Gene

  • Galectin 14 Pseudogene 3
  • AC005176.1 5

External Ids for LOC100129935 Gene

Previous GeneCards Identifiers for LOC100129935 Gene

  • GC19U900767
  • GC19P044823
  • GC19P040129

Summaries for LOC100129935 Gene

GeneCards Summary for LOC100129935 Gene

LOC100129935 (Galectin 14 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129935 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129935 Gene

Genomics for LOC100129935 Gene

GeneHancer (GH) Regulatory Elements for LOC100129935 Gene


Top Transcription factor binding sites by QIAGEN in the LOC100129935 gene promoter:

Genomic Locations for LOC100129935 Gene

Genomic Locations for LOC100129935 Gene
chr19:39,638,685-39,642,401
(GRCh38/hg38)
Size:
3,717 bases
Orientation:
Plus strand
chr19:40,129,325-40,133,041
(GRCh37/hg19)

Genomic View for LOC100129935 Gene

Genes around LOC100129935 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129935 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129935 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129935 Gene

Proteins for LOC100129935 Gene

Post-translational modifications for LOC100129935 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129935 Gene

Domains & Families for LOC100129935 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129935 Gene

Function for LOC100129935 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129935 Gene

Localization for LOC100129935 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129935 Gene

Pathways & Interactions for LOC100129935 Gene

SuperPathways for LOC100129935 Gene

No Data Available

Interacting Proteins for LOC100129935 Gene

Gene Ontology (GO) - Biological Process for LOC100129935 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129935 Gene

Drugs & Compounds for LOC100129935 Gene

No Compound Related Data Available

Transcripts for LOC100129935 Gene

mRNA/cDNA for LOC100129935 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100129935 Gene

Lectin, galactoside-binding, soluble, 14 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129935 Gene

No ASD Table

Relevant External Links for LOC100129935 Gene

GeneLoc Exon Structure for
LOC100129935

Expression for LOC100129935 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129935 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129935 Gene

This gene is overexpressed in Brain - Cerebellum (x13.1), Testis (x10.5), Brain - Cerebellar Hemisphere (x10.5), Brain - Substantia nigra (x4.6), and Brain - Hypothalamus (x4.3).

SOURCE GeneReport for Unigene cluster for LOC100129935 Gene:

Hs.659307
genes like me logo Genes that share expression patterns with LOC100129935: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129935 Gene

Orthologs for LOC100129935 Gene

Evolution for LOC100129935 Gene

ENSEMBL:
Gene Tree for LOC100129935 (if available)
TreeFam:
Gene Tree for LOC100129935 (if available)

No data available for Orthologs for LOC100129935 Gene

Paralogs for LOC100129935 Gene

No data available for Paralogs for LOC100129935 Gene

Variants for LOC100129935 Gene

Sequence variations from dbSNP and Humsavar for LOC100129935 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000246766 -- 39,638,586(+) A/G upstream_transcript_variant
rs1000847367 -- 39,639,866(+) C/G/T non_coding_transcript_variant
rs1001364889 -- 39,640,082(+) C/T intron_variant
rs1001465061 -- 39,639,139(+) C/A non_coding_transcript_variant
rs1001602919 -- 39,640,745(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100129935 Gene

Variant ID Type Subtype PubMed ID
dgv3529n100 CNV loss 25217958
esv2718554 CNV deletion 23290073
esv34120 CNV loss 18971310
nsv1062653 CNV gain 25217958
nsv2482 CNV deletion 18451855
nsv579509 CNV gain 21841781
nsv579511 CNV loss 21841781
nsv817835 CNV loss 17921354

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100129935 Gene

Disorders for LOC100129935 Gene

Additional Disease Information for LOC100129935

No disorders were found for LOC100129935 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129935 Gene

Publications for LOC100129935 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC100129935 Gene

Sources for LOC100129935 Gene

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