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Aliases for LOC100129935 Gene

Aliases for LOC100129935 Gene

  • Galectin 14 Pseudogene 3
  • Lectin, Galactoside Binding Soluble 14 Pseudogene 3
  • AC005176.1 5

External Ids for LOC100129935 Gene

Previous GeneCards Identifiers for LOC100129935 Gene

  • GC19U900767
  • GC19P044823
  • GC19P040129

Summaries for LOC100129935 Gene

GeneCards Summary for LOC100129935 Gene

LOC100129935 (Galectin 14 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129935 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129935 Gene

Genomics for LOC100129935 Gene

GeneHancer (GH) Regulatory Elements for LOC100129935 Gene

Promoters and enhancers for LOC100129935 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J039427 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13.6 -206.5 -206539 9.7 MLX ZFP64 DMAP1 IRF4 YY1 E2F8 ZNF416 ZNF143 SP3 NFYC RPS16 HNRNPL FBL ZNF780B AKT2 PLEKHG2 RN7SL566P ENSG00000269688 SUPT5H EID2B
GH19J039397 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13.6 -231.6 -231610 20 CLOCK MLX ZFP64 FEZF1 DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 ZFP36 PAF1 HNRNPL FBL ZNF780B SUPT5H RN7SL566P ZNF780A ENSG00000269688 AKT2
GH19J040596 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13.6 +963.0 963011 10 CLOCK MLX FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF416 ZNF143 ZNF548 LTBP4 HNRNPUL1 SNRPA ENSG00000269843 ZNF780B CCDC97 ZNF780A AKT2 FBL COQ8B
GH19J038647 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13.6 -978.9 -978892 25.6 ZFP64 FEZF1 DMAP1 YY1 ZNF213 ZNF143 ZNF548 SP3 NFYC ZC3H11A ACTN4 HNRNPL ZFP30 ZNF607 ZNF781 ZNF573 SUPT5H ENSG00000267152 PAK4 RN7SL566P
GH19J039125 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 13.6 -511.3 -511332 4.5 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF416 ZNF143 SP3 NFYC PAK4 PIR35823 HNRNPL FBL ENSG00000269172 ZNF780B ZNF780A ENSG00000269688 EID2B RN7SL566P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129935 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100129935 gene promoter:
  • LyF-1
  • RSRFC4
  • CUTL1
  • Bach2
  • Pax-4a
  • FOXJ2 (long isoform)
  • FOXJ2
  • IRF-1
  • MEF-2A

Genomic Locations for LOC100129935 Gene

Genomic Locations for LOC100129935 Gene
3,717 bases
Plus strand
3,717 bases
Plus strand

Genomic View for LOC100129935 Gene

Genes around LOC100129935 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129935 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129935 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129935 Gene

Proteins for LOC100129935 Gene

Post-translational modifications for LOC100129935 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129935 Gene

Domains & Families for LOC100129935 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129935 Gene

Function for LOC100129935 Gene

Phenotypes From GWAS Catalog for LOC100129935 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129935 Gene

Localization for LOC100129935 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129935 Gene

Pathways & Interactions for LOC100129935 Gene

SuperPathways for LOC100129935 Gene

No Data Available

Interacting Proteins for LOC100129935 Gene

Gene Ontology (GO) - Biological Process for LOC100129935 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC100129935 Gene

Drugs & Compounds for LOC100129935 Gene

No Compound Related Data Available

Transcripts for LOC100129935 Gene

mRNA/cDNA for LOC100129935 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100129935 Gene

Lectin, galactoside-binding, soluble, 14 pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129935 Gene

No ASD Table

Relevant External Links for LOC100129935 Gene

GeneLoc Exon Structure for

Expression for LOC100129935 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129935 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129935 Gene

This gene is overexpressed in Brain - Cerebellum (x13.1), Testis (x10.5), Brain - Cerebellar Hemisphere (x10.5), Brain - Substantia nigra (x4.6), and Brain - Hypothalamus (x4.3).

SOURCE GeneReport for Unigene cluster for LOC100129935 Gene:

genes like me logo Genes that share expression patterns with LOC100129935: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129935 Gene

Orthologs for LOC100129935 Gene

Evolution for LOC100129935 Gene

Gene Tree for LOC100129935 (if available)
Gene Tree for LOC100129935 (if available)

No data available for Orthologs for LOC100129935 Gene

Paralogs for LOC100129935 Gene

No data available for Paralogs for LOC100129935 Gene

Variants for LOC100129935 Gene

Sequence variations from dbSNP and Humsavar for LOC100129935 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000246766 -- 39,638,586(+) A/G upstream_transcript_variant
rs1000847367 -- 39,639,866(+) C/G/T non_coding_transcript_variant
rs1001364889 -- 39,640,082(+) C/T intron_variant
rs1001465061 -- 39,639,139(+) C/A non_coding_transcript_variant
rs1001602919 -- 39,640,745(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100129935 Gene

Variant ID Type Subtype PubMed ID
nsv817835 CNV loss 17921354
nsv579511 CNV loss 21841781
nsv579509 CNV gain 21841781
nsv2482 CNV deletion 18451855
nsv1062653 CNV gain 25217958
esv34120 CNV loss 18971310
esv2718554 CNV deletion 23290073
dgv3529n100 CNV loss 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100129935 Gene

Disorders for LOC100129935 Gene

Additional Disease Information for LOC100129935

No disorders were found for LOC100129935 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129935 Gene

Publications for LOC100129935 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC100129935 Gene

Sources for LOC100129935 Gene

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