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Aliases for LOC100129854 Gene

Subcategory (RNA class) for LOC100129854 Gene

lncRNA

Aliases for LOC100129854 Gene

  • Arginase 2 Pseudogene 3
  • Arginase, Type II Pseudogene 3
  • AL080285.1 5

External Ids for LOC100129854 Gene

ORGUL Members for LOC100129854 Gene

Previous GeneCards Identifiers for LOC100129854 Gene

  • GC06U901153
  • GC06P100717
  • GC06P100610

Summaries for LOC100129854 Gene

GeneCards Summary for LOC100129854 Gene

LOC100129854 (Arginase 2 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC100129854 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129854 Gene

Genomics for LOC100129854 Gene

GeneHancer (GH) Regulatory Elements for LOC100129854 Gene

Promoters and enhancers for LOC100129854 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J100175 Enhancer 1 Ensembl ENCODE 650.7 -0.2 -242 2.6 PKNOX1 FOXA2 MZF1 FEZF1 ZNF2 RAD21 ZSCAN5C SCRT2 FOS RUNX3 LOC100129854 LOC102724406 LOC105377911
GH06J100210 Enhancer 1.1 VISTA UCNEbase 0.3 +33.6 33598 1.5 FOXA2 POLR2A MAFG EZH2 LOC100129854 GC06M100387
GH06J100171 Enhancer 0.7 ENCODE 0.4 -5.3 -5252 1.3 BATF IRF4 EED SCRT2 ATF7 ETV6 IKZF2 RUNX3 CREM CBFB LOC102724406 LOC100129854 LOC105377911
GH06J100228 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.2 +51.9 51907 1.4 PKNOX1 ATF1 SIN3A FEZF1 ZNF2 ZNF48 ATF7 RUNX3 SP5 REST LOC100129854 GC06M100387
GH06J100202 Enhancer 0.9 Ensembl ENCODE 0.3 +26.1 26110 1.7 JUN MAX CEBPG GTF3C2 FOSL1 POLR3A POLR2A RCOR1 FOSL2 NFE2 ASCC3 LOC101927365 LOC100129854 GC06M100387
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129854 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129854 Gene

Genomic Locations for LOC100129854 Gene
chr6:100,177,178-100,178,192
(GRCh38/hg38)
Size:
1,015 bases
Orientation:
Plus strand
chr6:100,625,054-100,626,068
(GRCh37/hg19)
Size:
1,015 bases
Orientation:
Plus strand

Genomic View for LOC100129854 Gene

Genes around LOC100129854 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129854 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129854 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129854 Gene

Proteins for LOC100129854 Gene

Post-translational modifications for LOC100129854 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129854 Gene

Domains & Families for LOC100129854 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129854 Gene

Function for LOC100129854 Gene

Phenotypes From GWAS Catalog for LOC100129854 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129854 Gene

Localization for LOC100129854 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129854 Gene

Pathways & Interactions for LOC100129854 Gene

SuperPathways for LOC100129854 Gene

No Data Available

Interacting Proteins for LOC100129854 Gene

Gene Ontology (GO) - Biological Process for LOC100129854 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129854 Gene

Drugs & Compounds for LOC100129854 Gene

No Compound Related Data Available

Transcripts for LOC100129854 Gene

mRNA/cDNA for LOC100129854 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129854 Gene

No ASD Table

Relevant External Links for LOC100129854 Gene

GeneLoc Exon Structure for
LOC100129854

Expression for LOC100129854 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129854 Gene

genes like me logo Genes that share expression patterns with LOC100129854: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129854 Gene

Orthologs for LOC100129854 Gene

Evolution for LOC100129854 Gene

ENSEMBL:
Gene Tree for LOC100129854 (if available)
TreeFam:
Gene Tree for LOC100129854 (if available)

No data available for Orthologs for LOC100129854 Gene

Paralogs for LOC100129854 Gene

No data available for Paralogs for LOC100129854 Gene

Variants for LOC100129854 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129854 Gene

Disorders for LOC100129854 Gene

No disorders were found for LOC100129854 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129854 Gene

Publications for LOC100129854 Gene

No publications were found for LOC100129854 Gene.

Products for LOC100129854 Gene

Sources for LOC100129854 Gene

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