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Aliases for LOC100129844 Gene

Aliases for LOC100129844 Gene

  • DnaJ Heat Shock Protein Family (Hsp40) Member C7 Pseudogene 3
  • DnaJ (Hsp40) Homolog, Subfamily C, Member 7 Pseudogene 3
  • AL592429.1 5

External Ids for LOC100129844 Gene

Previous GeneCards Identifiers for LOC100129844 Gene

  • GC06U901260
  • GC06P139676

Summaries for LOC100129844 Gene

GeneCards Summary for LOC100129844 Gene

LOC100129844 (DnaJ Heat Shock Protein Family (Hsp40) Member C7 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129844 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129844 Gene

Genomics for LOC100129844 Gene

GeneHancer (GH) Regulatory Elements for LOC100129844 Gene

Promoters and enhancers for LOC100129844 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J139334 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 659.2 -1.0 -1019 5.5 SMAD1 CEBPG BATF RELA IRF9 POLR2A FOS NFE2 ATF7 IKZF2 LOC100129844 LOC102723690 HECA TXLNB
GH06J139322 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.6 -13588 3.4 HDGF FOXA2 SIN3A BMI1 BATF YY1 FOS ETV6 IKZF2 RUNX3 TXLNB LOC102723690 LINC01625 HECA ABRACL LOC100129844
GH06J139366 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +34.3 34288 11.4 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 SP3 CITED2 ENSG00000225148 LOC102723690 REPS1 HEBP2 LOC100129844
GH06J139343 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +5.3 5299 0.2 GATA3 IKZF1 EGR2 LOC102723690 LOC100129844 CITED2
GH06J139364 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +26.5 26509 0.3 CTCF ZNF654 ZNF362 TRIM22 ZNF384 REST ELF1 RAD21 GABPA ZNF213 ENSG00000231329 LOC102723690 HECA CITED2 LOC100129844
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129844 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129844 Gene

Genomic Locations for LOC100129844 Gene
chr6:139,338,018-139,339,642
(GRCh38/hg38)
Size:
1,625 bases
Orientation:
Plus strand
chr6:139,659,155-139,660,769
(GRCh37/hg19)
Size:
1,615 bases
Orientation:
Plus strand

Genomic View for LOC100129844 Gene

Genes around LOC100129844 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129844 Gene

Proteins for LOC100129844 Gene

Post-translational modifications for LOC100129844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129844 Gene

Domains & Families for LOC100129844 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129844 Gene

Function for LOC100129844 Gene

Phenotypes From GWAS Catalog for LOC100129844 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129844 Gene

Localization for LOC100129844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129844 Gene

Pathways & Interactions for LOC100129844 Gene

SuperPathways for LOC100129844 Gene

No Data Available

Interacting Proteins for LOC100129844 Gene

Gene Ontology (GO) - Biological Process for LOC100129844 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129844 Gene

Drugs & Compounds for LOC100129844 Gene

No Compound Related Data Available

Transcripts for LOC100129844 Gene

mRNA/cDNA for LOC100129844 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129844 Gene

No ASD Table

Relevant External Links for LOC100129844 Gene

GeneLoc Exon Structure for
LOC100129844

Expression for LOC100129844 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129844 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129844 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (x6.6), Spleen (x5.1), and Small Intestine - Terminal Ileum (x4.4).
genes like me logo Genes that share expression patterns with LOC100129844: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129844 Gene

Orthologs for LOC100129844 Gene

Evolution for LOC100129844 Gene

ENSEMBL:
Gene Tree for LOC100129844 (if available)
TreeFam:
Gene Tree for LOC100129844 (if available)

No data available for Orthologs for LOC100129844 Gene

Paralogs for LOC100129844 Gene

No data available for Paralogs for LOC100129844 Gene

Variants for LOC100129844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129844 Gene

Disorders for LOC100129844 Gene

No disorders were found for LOC100129844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129844 Gene

Publications for LOC100129844 Gene

No publications were found for LOC100129844 Gene.

Products for LOC100129844 Gene

Sources for LOC100129844 Gene

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