Aliases for LOC100129844 Gene

Aliases for LOC100129844 Gene

  • DnaJ Heat Shock Protein Family (Hsp40) Member C7 Pseudogene 3
  • DnaJ (Hsp40) Homolog, Subfamily C, Member 7 Pseudogene 3

External Ids for LOC100129844 Gene

Previous GeneCards Identifiers for LOC100129844 Gene

  • GC06U901260
  • GC06P139676

Summaries for LOC100129844 Gene

GeneCards Summary for LOC100129844 Gene

LOC100129844 (DnaJ Heat Shock Protein Family (Hsp40) Member C7 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129844 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100129844 Gene

Genomics for LOC100129844 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100129844 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J139339 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +0.9 858 1.4 ATF7 ZNF740 CEBPA CEBPB CEBPG ATF4 GABPA ATF3 POLR2A IRF9 ENSG00000218565 LOC100129844 lnc-HECA-4 ENSG00000226571 lnc-CITED2-5 TXLNB CITED2 MN297907-011
GH06J139338 Enhancer 0.6 FANTOM5 dbSUPER 600.7 -0.2 -167 0.2 NFE2 MAFG POLR2A ENSG00000218565 LOC100129844 lnc-HECA-4 HECA TXLNB CITED2 ENSG00000226571 MN297907-011
GH06J139337 Enhancer 0.6 ENCODE dbSUPER 600.7 -0.4 -404 0.2 NFE2 MAFG POLR2A ENSG00000218565 LOC100129844 lnc-HECA-4 TXLNB CITED2 ENSG00000226571 MN297907-011
GH06J139343 Enhancer 0.6 ENCODE dbSUPER 0.4 +5.2 5177 0.2 IKZF1 GATA3 EGR2 ENSG00000226571 LOC100129844 lnc-CITED2-5 TXLNB CITED2 MN297907-011
GH06J139349 Enhancer 0.5 ENCODE 0.4 +11.4 11447 0.2 FOXA1 CTBP1 PKNOX1 GATA3 SMARCE1 lnc-CITED2-5 ENSG00000231329 ENSG00000226571 LOC100129844 CITED2 TXLNB MN297907-011
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100129844 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100129844 Gene

Genomic Locations for LOC100129844 Gene
chr6:139,338,182-139,339,642
(GRCh38/hg38)
Size:
1,461 bases
Orientation:
Plus strand
chr6:139,659,155-139,660,769
(GRCh37/hg19)
Size:
1,615 bases
Orientation:
Plus strand

Genomic View for LOC100129844 Gene

Genes around LOC100129844 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129844 Gene

Proteins for LOC100129844 Gene

Post-translational modifications for LOC100129844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129844 Gene

Domains & Families for LOC100129844 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100129844 Gene

Function for LOC100129844 Gene

Phenotypes From GWAS Catalog for LOC100129844 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129844 Gene

Localization for LOC100129844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129844 Gene

Pathways & Interactions for LOC100129844 Gene

PathCards logo

SuperPathways for LOC100129844 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100129844 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100129844 Gene

Drugs & Compounds for LOC100129844 Gene

No Compound Related Data Available

Transcripts for LOC100129844 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129844 Gene

No ASD Table

Relevant External Links for LOC100129844 Gene

GeneLoc Exon Structure for
LOC100129844

No data available for mRNA/cDNA for LOC100129844 Gene

Expression for LOC100129844 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100129844 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129844 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (x6.6), Spleen (x5.1), and Small Intestine - Terminal Ileum (x4.4).
genes like me logo Genes that share expression patterns with LOC100129844: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129844 Gene

Orthologs for LOC100129844 Gene

No data available for Orthologs and Evolution for LOC100129844 Gene

Paralogs for LOC100129844 Gene

No data available for Paralogs for LOC100129844 Gene

Variants for LOC100129844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129844 Gene

Disorders for LOC100129844 Gene

No disorders were found for LOC100129844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129844 Gene

Publications for LOC100129844 Gene

No publications were found for LOC100129844 Gene.

No data available for Mastermind for LOC100129844 Gene

Products for LOC100129844 Gene

Sources for LOC100129844 Gene