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Aliases for LOC100129818 Gene

Aliases for LOC100129818 Gene

  • Tubulin Alpha 1a Pseudogene 3
  • AC239600.2 5

External Ids for LOC100129818 Gene

Previous GeneCards Identifiers for LOC100129818 Gene

  • GC0XU901087
  • GC0XM114565
  • GC0XM114659

Summaries for LOC100129818 Gene

GeneCards Summary for LOC100129818 Gene

LOC100129818 (Tubulin Alpha 1a Pseudogene) is a Pseudogene.

Additional gene information for LOC100129818 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129818 Gene

Genomics for LOC100129818 Gene

GeneHancer (GH) Regulatory Elements for LOC100129818 Gene

Promoters and enhancers for LOC100129818 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ115449 Enhancer 0.8 ENCODE 0.3 -24.3 -24300 0.2 ELF3 FOXA2 THRB RAD21 RARA RXRA CEBPB NR2F2 NFIL3 SP1 GC0XM115456 LOC100129818
GH0XJ115344 Enhancer 1.1 Ensembl ENCODE 0.2 +80.4 80385 2.3 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 FOS NFKBIZ LRCH2 LUZP4 LOC100129818
GH0XJ115367 Enhancer 1 FANTOM5 Ensembl ENCODE 0.2 +57.9 57895 1.2 ZNF362 ZBTB21 OSR2 ZFP69B ZFHX2 ZNF692 IKZF1 ZNF629 PRDM10 ZBTB17 LOC100129818 LUZP4
GH0XJ115371 Enhancer 0.7 Ensembl ENCODE 0.2 +53.0 52999 1.6 SP1 JUND JUN ZSCAN5C FOSL2 PRDM1 LOC100129818 LUZP4
GH0XJ115330 Enhancer 0.6 ENCODE 0.2 +95.0 94993 0.2 CTCF ZNF654 TRIM22 ZNF384 REST KDM3A RAD21 SMC3 ZNF143 RUNX3 LUZP4 LOC100129818
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129818 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129818 Gene

Genomic Locations for LOC100129818 Gene
chrX:115,424,045-115,425,694
(GRCh38/hg38)
Size:
1,650 bases
Orientation:
Minus strand
chrX:114,658,525-114,660,070
(GRCh37/hg19)
Size:
1,546 bases
Orientation:
Minus strand

Genomic View for LOC100129818 Gene

Genes around LOC100129818 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129818 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129818 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129818 Gene

Proteins for LOC100129818 Gene

Post-translational modifications for LOC100129818 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129818 Gene

Domains & Families for LOC100129818 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129818 Gene

Function for LOC100129818 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129818 Gene

Localization for LOC100129818 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129818 Gene

Pathways & Interactions for LOC100129818 Gene

SuperPathways for LOC100129818 Gene

No Data Available

Interacting Proteins for LOC100129818 Gene

Gene Ontology (GO) - Biological Process for LOC100129818 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129818 Gene

Drugs & Compounds for LOC100129818 Gene

No Compound Related Data Available

Transcripts for LOC100129818 Gene

mRNA/cDNA for LOC100129818 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129818 Gene

No ASD Table

Relevant External Links for LOC100129818 Gene

GeneLoc Exon Structure for
LOC100129818

Expression for LOC100129818 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129818 Gene

mRNA expression in normal human tissues for LOC100129818 Gene
genes like me logo Genes that share expression patterns with LOC100129818: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129818 Gene

Orthologs for LOC100129818 Gene

Evolution for LOC100129818 Gene

ENSEMBL:
Gene Tree for LOC100129818 (if available)
TreeFam:
Gene Tree for LOC100129818 (if available)

No data available for Orthologs for LOC100129818 Gene

Paralogs for LOC100129818 Gene

No data available for Paralogs for LOC100129818 Gene

Variants for LOC100129818 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129818 Gene

Disorders for LOC100129818 Gene

No disorders were found for LOC100129818 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129818 Gene

Publications for LOC100129818 Gene

No publications were found for LOC100129818 Gene.

Products for LOC100129818 Gene

Sources for LOC100129818 Gene

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