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Aliases for LOC100129779 Gene

Subcategory (RNA class) for LOC100129779 Gene

lncRNA

Aliases for LOC100129779 Gene

  • DnaJ Heat Shock Protein Family (Hsp40) Member B7 Pseudogene 3
  • DnaJ (Hsp40) Homolog, Subfamily B, Member 7 Pseudogene 3
  • AP001888.1 5

External Ids for LOC100129779 Gene

ORGUL Members for LOC100129779 Gene

Previous GeneCards Identifiers for LOC100129779 Gene

  • GC11U901007
  • GC11M069261
  • GC11M069552

Summaries for LOC100129779 Gene

GeneCards Summary for LOC100129779 Gene

LOC100129779 (DnaJ Heat Shock Protein Family (Hsp40) Member B7 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC100129779 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129779 Gene

Genomics for LOC100129779 Gene

GeneHancer (GH) Regulatory Elements for LOC100129779 Gene

Promoters and enhancers for LOC100129779 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J069706 Promoter/Enhancer 1.4 EPDnew ENCODE dbSUPER 0.3 +33.3 33339 0.2 CTCF RB1 ZBTB21 SIN3A ZIC2 RAD21 ZNF335 GLIS2 PATZ1 ZNF143 FGF19 LOC100129779 GC11M069658
GH11J069733 Enhancer 0.5 ENCODE 0.7 +4.1 4135 0.9 MTA2 ZNF184 ZNF366 ZNF512 PRDM1 FGF4 FGF3 LTO1 LOC100129779 FGF19 GC11M069658
GH11J069718 Enhancer 0.7 ENCODE 0.4 +19.7 19689 0.2 CTCF KLF1 MAX SIN3A EBF1 ZIC2 RAD21 GATA3 ZNF143 SMC3 FGF19 LOC100129779 GC11M069658
GH11J069705 Enhancer 0.8 ENCODE 0.3 +31.6 31612 2.2 PKNOX1 FEZF1 THRB ZNF48 RARA ZNF335 HMG20B ZNF398 ZNF843 KAT8 FGF19 ENSG00000246889 LOC100129779 GC11M069658
GH11J069708 Enhancer 0.7 ENCODE 0.3 +28.7 28708 1.1 IRF2 FOXA2 ARID4B ERF DMAP1 RAD21 RBPJ ZSCAN9 RARA TEAD3 FGF19 LOC100129779 GC11M069658
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129779 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129779 Gene

Genomic Locations for LOC100129779 Gene
chr11:69,737,298-69,738,017
(GRCh38/hg38)
Size:
720 bases
Orientation:
Minus strand
chr11:69,552,066-69,552,785
(GRCh37/hg19)
Size:
720 bases
Orientation:
Minus strand

Genomic View for LOC100129779 Gene

Genes around LOC100129779 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129779 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129779 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129779 Gene

Proteins for LOC100129779 Gene

Post-translational modifications for LOC100129779 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129779 Gene

Domains & Families for LOC100129779 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129779 Gene

Function for LOC100129779 Gene

Phenotypes From GWAS Catalog for LOC100129779 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129779 Gene

Localization for LOC100129779 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129779 Gene

Pathways & Interactions for LOC100129779 Gene

SuperPathways for LOC100129779 Gene

No Data Available

Interacting Proteins for LOC100129779 Gene

Gene Ontology (GO) - Biological Process for LOC100129779 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129779 Gene

Drugs & Compounds for LOC100129779 Gene

No Compound Related Data Available

Transcripts for LOC100129779 Gene

mRNA/cDNA for LOC100129779 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129779 Gene

No ASD Table

Relevant External Links for LOC100129779 Gene

GeneLoc Exon Structure for
LOC100129779

Expression for LOC100129779 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129779 Gene

genes like me logo Genes that share expression patterns with LOC100129779: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129779 Gene

Orthologs for LOC100129779 Gene

Evolution for LOC100129779 Gene

ENSEMBL:
Gene Tree for LOC100129779 (if available)
TreeFam:
Gene Tree for LOC100129779 (if available)

No data available for Orthologs for LOC100129779 Gene

Paralogs for LOC100129779 Gene

No data available for Paralogs for LOC100129779 Gene

Variants for LOC100129779 Gene

Variation tolerance for LOC100129779 Gene

Gene Damage Index Score: 7.11; 80.56% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for LOC100129779 Gene

Disorders for LOC100129779 Gene

No disorders were found for LOC100129779 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129779 Gene

Publications for LOC100129779 Gene

No publications were found for LOC100129779 Gene.

Products for LOC100129779 Gene

Sources for LOC100129779 Gene

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