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Aliases for LOC100129728 Gene

Aliases for LOC100129728 Gene

  • Nucleic Acid Binding Protein 2 Pseudogene 3
  • AC105384.2 5

External Ids for LOC100129728 Gene

Previous GeneCards Identifiers for LOC100129728 Gene

  • GC04U900905
  • GC04M054489
  • GC04M054774

Summaries for LOC100129728 Gene

GeneCards Summary for LOC100129728 Gene

LOC100129728 (Nucleic Acid Binding Protein 2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129728 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129728 Gene

Genomics for LOC100129728 Gene

GeneHancer (GH) Regulatory Elements for LOC100129728 Gene

Promoters and enhancers for LOC100129728 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J053929 Enhancer 1 Ensembl ENCODE 650.7 -1.8 -1823 0.9 RB1 ARID4B RAD21 YY1 ZNF143 RCOR1 RUNX3 MIXL1 ZNF654 USF2 LOC100129728 GC04M053928 GSX2 CHIC2 ENSG00000272650 RPL21P44 ENSG00000282278
GH04J053928 Enhancer 0.9 Ensembl ENCODE 650.7 -0.8 -802 0.3 FOXA2 CEBPG FEZF1 RAD21 RARA ATF7 RXRA HLF CEBPB ZNF398 GC04M053928 LOC100129728 GSX2 CHIC2 RPL21P44 ENSG00000282278
GH04J053943 Enhancer 0.9 ENCODE 0.4 -15.9 -15878 1.1 PKNOX1 ARNT FEZF1 ZNF2 ZNF213 KLF7 SP3 TSHZ1 ZNF488 ZNF623 ENSG00000251105 MORF4L2P1 ENSG00000248317 LINC02358 LOC105377658 ENSG00000249706 LOC100129728 RPL21P44 ENSG00000282278
GH04J053932 Enhancer 0.5 FANTOM5 ENCODE 0.7 -4.8 -4804 1.2 JUND GSX2 LOC100129728 RPL21P44 ENSG00000282278
GH04J053937 Enhancer 0.6 ENCODE 0.4 -9.9 -9892 0.3 ZNF398 ZIC2 ZNF843 OSR2 ZFHX2 JUND EGR1 ZNF341 FOS PRDM1 GSX2 LOC100129728 RPL21P44 ENSG00000282278
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129728 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129728 Gene

Genomic Locations for LOC100129728 Gene
chr4:53,927,193-53,928,150
(GRCh38/hg38)
Size:
958 bases
Orientation:
Minus strand
chr4:54,793,440-54,794,305
(GRCh37/hg19)
Size:
866 bases
Orientation:
Minus strand

Genomic View for LOC100129728 Gene

Genes around LOC100129728 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129728 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129728 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129728 Gene

Proteins for LOC100129728 Gene

Post-translational modifications for LOC100129728 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129728 Gene

Domains & Families for LOC100129728 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129728 Gene

Function for LOC100129728 Gene

Phenotypes From GWAS Catalog for LOC100129728 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129728 Gene

Localization for LOC100129728 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129728 Gene

Pathways & Interactions for LOC100129728 Gene

SuperPathways for LOC100129728 Gene

No Data Available

Interacting Proteins for LOC100129728 Gene

Gene Ontology (GO) - Biological Process for LOC100129728 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129728 Gene

Drugs & Compounds for LOC100129728 Gene

No Compound Related Data Available

Transcripts for LOC100129728 Gene

mRNA/cDNA for LOC100129728 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129728 Gene

No ASD Table

Relevant External Links for LOC100129728 Gene

GeneLoc Exon Structure for
LOC100129728

Expression for LOC100129728 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129728 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129728 Gene

This gene is overexpressed in Whole Blood (x4.3).
genes like me logo Genes that share expression patterns with LOC100129728: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129728 Gene

Orthologs for LOC100129728 Gene

Evolution for LOC100129728 Gene

ENSEMBL:
Gene Tree for LOC100129728 (if available)
TreeFam:
Gene Tree for LOC100129728 (if available)

No data available for Orthologs for LOC100129728 Gene

Paralogs for LOC100129728 Gene

No data available for Paralogs for LOC100129728 Gene

Variants for LOC100129728 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129728 Gene

Disorders for LOC100129728 Gene

No disorders were found for LOC100129728 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129728 Gene

Publications for LOC100129728 Gene

No publications were found for LOC100129728 Gene.

Products for LOC100129728 Gene

Sources for LOC100129728 Gene

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