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Aliases for LOC100129724 Gene

Subcategory (RNA class) for LOC100129724 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC100129724 Gene

  • Uncharacterized LOC100129724 3
  • AC013472.1 5

External Ids for LOC100129724 Gene

Previous GeneCards Identifiers for LOC100129724 Gene

  • GC02M026941
  • GC02M027090
  • GC02U901809

Summaries for LOC100129724 Gene

GeneCards Summary for LOC100129724 Gene

LOC100129724 (Uncharacterized LOC100129724) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100129724 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129724 Gene

Genomics for LOC100129724 Gene

GeneHancer (GH) Regulatory Elements for LOC100129724 Gene

Promoters and enhancers for LOC100129724 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I027015 Enhancer 1.4 Ensembl ENCODE dbSUPER 550.8 -1.4 -1420 2.5 ATF1 FOXA2 ARNT YY1 ZNF766 CBX5 ARID2 ATF7 RXRA CAVIN1 LOC100129724 KHK GC02M027029 MAPRE3
GH02I027014 Promoter/Enhancer 0.7 EPDnew dbSUPER 550.8 +0.0 4 0.1 LOC100129724 MAPRE3 KHK LOC105374337
GH02I026970 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 11.7 +43.1 43112 2.9 HDGF PKNOX1 CLOCK ARID4B SIN3A IRF4 ZNF48 E2F8 ZNF207 ZNF143 MAPRE3 KHK LOC100129724 LOC105374337 AGBL5 AGBL5-AS1 DPYSL5 EMILIN1 ATRAID SLC5A6
GH02I027085 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 9.7 -72.7 -72747 4.8 HDGF CLOCK MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 KHK GC02M027085 SNX17 ATRAID GTF3C2 NRBP1 TMEM214 CAD LOC105374363 GPN1
GH02I027090 Enhancer 1.4 Ensembl ENCODE dbSUPER 9.8 -79.2 -79176 6.6 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 ZNF143 KHK CGREF1 ABHD1 SLC5A6 ATRAID CAD PRR30 TCF23 PREB AGBL5-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129724 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129724 Gene

Genomic Locations for LOC100129724 Gene
chr2:26,979,572-27,014,739
(GRCh38/hg38)
Size:
35,168 bases
Orientation:
Minus strand

Genomic View for LOC100129724 Gene

Genes around LOC100129724 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129724 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129724 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129724 Gene

Proteins for LOC100129724 Gene

Post-translational modifications for LOC100129724 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129724 Gene

Domains & Families for LOC100129724 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129724 Gene

Function for LOC100129724 Gene

Phenotypes From GWAS Catalog for LOC100129724 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129724 Gene

Localization for LOC100129724 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129724 Gene

Pathways & Interactions for LOC100129724 Gene

SuperPathways for LOC100129724 Gene

No Data Available

Interacting Proteins for LOC100129724 Gene

Gene Ontology (GO) - Biological Process for LOC100129724 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129724 Gene

Drugs & Compounds for LOC100129724 Gene

No Compound Related Data Available

Transcripts for LOC100129724 Gene

mRNA/cDNA for LOC100129724 Gene

(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100129724 Gene

Uncharacterized LOC100129724:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129724 Gene

No ASD Table

Relevant External Links for LOC100129724 Gene

GeneLoc Exon Structure for
LOC100129724

Expression for LOC100129724 Gene

SOURCE GeneReport for Unigene cluster for LOC100129724 Gene:

Hs.666730
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129724 Gene

Orthologs for LOC100129724 Gene

Evolution for LOC100129724 Gene

ENSEMBL:
Gene Tree for LOC100129724 (if available)
TreeFam:
Gene Tree for LOC100129724 (if available)

No data available for Orthologs for LOC100129724 Gene

Paralogs for LOC100129724 Gene

No data available for Paralogs for LOC100129724 Gene

Variants for LOC100129724 Gene

Sequence variations from dbSNP and Humsavar for LOC100129724 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000072175 -- 26,991,802(-) G/A intron_variant
rs1000085694 -- 26,985,023(-) A/G genic_downstream_transcript_variant, intron_variant
rs1000210276 -- 27,014,599(-) C/A upstream_transcript_variant
rs1000266984 -- 27,013,324(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000481438 -- 27,006,634(-) A/G genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129724 Gene

Disorders for LOC100129724 Gene

Additional Disease Information for LOC100129724

No disorders were found for LOC100129724 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129724 Gene

Publications for LOC100129724 Gene

No publications were found for LOC100129724 Gene.

Products for LOC100129724 Gene

Sources for LOC100129724 Gene

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