Aliases for LOC100129697 Gene
Aliases for LOC100129697 Gene
External Ids for LOC100129697 Gene
- Entrez Gene: 100129697
- Ensembl: ENSG00000205018
Previous GeneCards Identifiers for LOC100129697 Gene
- GC16P087535
- GC16P074704
Summaries for LOC100129697 Gene
GeneCards Summary for LOC100129697 Gene
LOC100129697 (Uncharacterized LOC100129697) is a Protein Coding gene.
Additional gene information for LOC100129697 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129697 Gene
Genomics for LOC100129697 Gene
GeneHancer (GH) Regulatory Elements for LOC100129697 Gene
Promoters and enhancers for LOC100129697 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LOC100129697 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the LOC100129697 gene promoter:
-
- CUTL1
- CP2
- HSF2
- NF-1/L
- NF-1
- ARP-1
- LCR-F1
- Roaz
- HFH-3
- FOXI1
Regulatory Element Products
Genomic Locations for LOC100129697 Gene
Genomic Locations for LOC100129697 Gene
- chr16:88,939,789-88,951,524
- (GRCh38/hg38)
- Size:
- 11,736 bases
- Orientation:
- Plus strand
- chr16:89,006,197-89,017,932
- (GRCh37/hg19)
- Size:
- 11,736 bases
- Orientation:
- Plus strand
Genomic View for LOC100129697 Gene
Genes around LOC100129697 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16q24.3 by Entrez Gene
- 16q24.3 by Ensembl
LOC100129697 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC100129697 Gene
Proteins for LOC100129697 Gene
Post-translational modifications for LOC100129697 Gene
No Post-translational modifications
Other Protein References for LOC100129697 Gene
- REFSEQ proteins:
Antibody Products
- Search GeneTex for Antibodies for LOC100129697
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC100129697
- Origene Custom Protein Services for LOC100129697
- Search GeneTex for Proteins for LOC100129697
No data available for DME Specific Peptides for LOC100129697 Gene
Domains & Families for LOC100129697 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129697 Gene
Function for LOC100129697 Gene
Phenotypes From GWAS Catalog for LOC100129697 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC100129697
-
CRISPR Products
- Browse CRISPR knockouts for LOC100129697
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC100129697
miRNA Products
Inhibitory RNA Products
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC100129697
Clone Products
- VectorBuilder custom plasmid, inducible vectors for LOC100129697
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC100129697
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC100129697
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129697 Gene
Localization for LOC100129697 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129697 Gene
Transcripts for LOC100129697 Gene
mRNA/cDNA for LOC100129697 Gene
- (1) REFSEQ mRNAs :
- (3) Additional mRNA sequences :
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000378347 1812 bps (uc059ylu.1)
- (1) RNA Central transcripts :
Unigene Clusters for LOC100129697 Gene
- Uncharacterized LOC100129697:
- Representative Sequences:
CRISPR Products
- Browse CRISPR knockouts for LOC100129697
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC100129697
miRNA Products
Inhibitory RNA Products
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC100129697
Clone Products
- VectorBuilder custom plasmid, inducible vectors for LOC100129697
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC100129697
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC100129697
Relevant External Links for LOC100129697 Gene
- GeneLoc Exon Structure for
- LOC100129697
Expression for LOC100129697 Gene
mRNA differential expression in normal tissues according to GTEx for LOC100129697 Gene
This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.8) and Brain - Cerebellum (x5.7).
SOURCE GeneReport for Unigene cluster for LOC100129697 Gene:
Hs.689377
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129697 Gene
Orthologs for LOC100129697 Gene
No data available for Orthologs for LOC100129697 Gene
Paralogs for LOC100129697 Gene
No data available for Paralogs for LOC100129697 Gene
Variants for LOC100129697 Gene
| SNP ID | Clin | Chr 16 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000007589 | -- | 88,945,147(+) | A/G | intron_variant | |
| rs1000010322 | -- | 88,944,171(+) | A/T | intron_variant | |
| rs1000181458 | -- | 88,939,965(+) | GTCCG/GTCCGGTCCG | upstream_transcript_variant | |
| rs1000236659 | -- | 88,948,893(+) | T/C | intron_variant | |
| rs1000299026 | -- | 88,939,169(+) | T/G | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv952071 | CNV | deletion | 24416366 |
| nsv827840 | CNV | gain | 20364138 |
| nsv827839 | CNV | gain | 20364138 |
| nsv573719 | CNV | loss | 21841781 |
| nsv573674 | CNV | gain | 21841781 |
| nsv521217 | CNV | loss | 19592680 |
| nsv482951 | CNV | loss | 15286789 |
| nsv471115 | CNV | loss | 18288195 |
| nsv1071313 | CNV | deletion | 25765185 |
| nsv1066077 | CNV | gain | 25217958 |
| nsv1063024 | CNV | gain | 25217958 |
| nsv1061256 | CNV | gain | 25217958 |
| esv2715071 | CNV | deletion | 23290073 |
| esv2715070 | CNV | deletion | 23290073 |
| esv2715069 | CNV | deletion | 23290073 |
| esv2658652 | CNV | deletion | 23128226 |
| esv2036557 | CNV | deletion | 18987734 |
| esv1433786 | CNV | deletion | 17803354 |
| dgv37n68 | CNV | loss | 17160897 |
Gene Damage Index Score:
0.02;
0.53% of all genes are more intolerant (likely to be disease-causing)
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Additional Variant Information for LOC100129697 Gene
Disorders for LOC100129697 Gene
Additional Disease Information for LOC100129697
No disorders were found for LOC100129697 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129697 Gene
Publications for LOC100129697 Gene
No publications were found for LOC100129697 Gene.
Products for LOC100129697 Gene
- Browse R&D Systems for Antibodies
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- Browse R&D Systems for biochemical assays
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- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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- CloneReady with Over 120,000 Genes
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC100129697
- VectorBuilder custom plasmid, inducible vectors for LOC100129697
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC100129697
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC100129697
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC100129697
- GeneCopoeia miRNA 3'UTR Target clone products for LOC100129697
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC100129697
Sources for LOC100129697 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt