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Aliases for LOC100129636 Gene

Subcategory (RNA class) for LOC100129636 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC100129636 Gene

  • Uncharacterized LOC100129636 3
  • XXbac-BPG258E24.10 3
  • AL662791.5 5

External Ids for LOC100129636 Gene

Previous GeneCards Identifiers for LOC100129636 Gene

  • GC06U901340
  • GC06P029111
  • GC06P029003

Summaries for LOC100129636 Gene

GeneCards Summary for LOC100129636 Gene

LOC100129636 (Uncharacterized LOC100129636) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100129636 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129636 Gene

Genomics for LOC100129636 Gene

GeneHancer (GH) Regulatory Elements for LOC100129636 Gene


Top Transcription factor binding sites by QIAGEN in the LOC100129636 gene promoter:

Genomic Locations for LOC100129636 Gene

Genomic Locations for LOC100129636 Gene
chr6:29,036,021-29,076,740
(GRCh38/hg38)
Size:
40,720 bases
Orientation:
Plus strand
chr6:29,004,000-29,044,517
(GRCh37/hg19)

Genomic View for LOC100129636 Gene

Genes around LOC100129636 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129636 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129636 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for LOC100129636 Gene

Post-translational modifications for LOC100129636 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129636 Gene

Domains & Families for LOC100129636 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129636 Gene

Function for LOC100129636 Gene

Animal Model Products

CRISPR Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129636 Gene

Localization for LOC100129636 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129636 Gene

Pathways & Interactions for LOC100129636 Gene

SuperPathways for LOC100129636 Gene

No Data Available

Interacting Proteins for LOC100129636 Gene

Gene Ontology (GO) - Biological Process for LOC100129636 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129636 Gene

Drugs & Compounds for LOC100129636 Gene

No Compound Related Data Available

Transcripts for LOC100129636 Gene

mRNA/cDNA for LOC100129636 Gene

(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129636 Gene

No ASD Table

Relevant External Links for LOC100129636 Gene

GeneLoc Exon Structure for
LOC100129636

Expression for LOC100129636 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129636 Gene

Orthologs for LOC100129636 Gene

Evolution for LOC100129636 Gene

ENSEMBL:
Gene Tree for LOC100129636 (if available)
TreeFam:
Gene Tree for LOC100129636 (if available)

No data available for Orthologs for LOC100129636 Gene

Paralogs for LOC100129636 Gene

No data available for Paralogs for LOC100129636 Gene

Variants for LOC100129636 Gene

Sequence variations from dbSNP and Humsavar for LOC100129636 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000024072 -- 29,069,667(+) T/C intron_variant
rs1000026140 -- 29,052,207(+) C/ intron_variant
rs1000041620 -- 29,045,268(+) G/A intron_variant
rs1000127910 -- 29,063,638(+) A/G intron_variant
rs1000180519 -- 29,072,314(+) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100129636 Gene

Variant ID Type Subtype PubMed ID
dgv10338n54 CNV gain 21841781
esv2763545 CNV loss 21179565
nsv1015796 CNV gain 25217958
nsv1032468 CNV loss 25217958
nsv1074388 CNV deletion 25765185
nsv1122126 CNV deletion 24896259
nsv1145096 CNV deletion 24896259
nsv601216 CNV gain 21841781
nsv830622 CNV gain 17160897
nsv830623 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100129636 Gene

Disorders for LOC100129636 Gene

Additional Disease Information for LOC100129636

No disorders were found for LOC100129636 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129636 Gene

Publications for LOC100129636 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 3 58

Products for LOC100129636 Gene

Sources for LOC100129636 Gene

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