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Aliases for LOC100129574 Gene

Aliases for LOC100129574 Gene

  • Chromosome 12 Open Reading Frame 29 Pseudogene 3
  • AC034244.2 5

External Ids for LOC100129574 Gene

Previous GeneCards Identifiers for LOC100129574 Gene

  • GC05U900965
  • GC05P056343
  • GC05P056410

Summaries for LOC100129574 Gene

GeneCards Summary for LOC100129574 Gene

LOC100129574 (Chromosome 12 Open Reading Frame 29 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129574 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129574 Gene

Genomics for LOC100129574 Gene

GeneHancer (GH) Regulatory Elements for LOC100129574 Gene

Promoters and enhancers for LOC100129574 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J057111 Enhancer 0.9 ENCODE 0.4 -8.5 -8506 1.2 FOXA2 MLX ARID4B ZNF48 YY1 RXRA SP5 MXD4 MIER2 PPARG LOC100129574 ENSG00000248652
GH05J057102 Enhancer 0.8 ENCODE 0.4 -17.6 -17612 2.1 ELF3 FOXA2 RARA ATF7 CREM MIXL1 RXRA CEBPB REST PPARG LOC100129574 ENSG00000248652
GH05J057138 Enhancer 0.7 ENCODE 0.4 +17.5 17531 0.2 CTCF RB1 ZNF384 RAD21 YY1 CC2D1A IKZF5 ZNF143 SMC3 ZNF362 LOC100129574 ENSG00000207293 GC05M057170
GH05J057095 Enhancer 0.6 ENCODE 0.3 -25.3 -25289 0.2 SOX13 CTCF KLF1 TFAP4 DACH1 KLF17 ERF MNT ZNF2 RAD21 SETD9 MIER3 ENSG00000248652 LOC100129574
GH05J057096 Enhancer 0.5 ENCODE 0.3 -25.6 -25589 0.2 E2F1 ZFHX2 KLF17 MNT ZIC2 RFX5 EGR2 ENSG00000248652 LOC100129574
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129574 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129574 Gene

Genomic Locations for LOC100129574 Gene
chr5:57,120,758-57,122,624
(GRCh38/hg38)
Size:
1,867 bases
Orientation:
Plus strand
chr5:56,416,585-56,418,451
(GRCh37/hg19)
Size:
1,867 bases
Orientation:
Plus strand

Genomic View for LOC100129574 Gene

Genes around LOC100129574 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129574 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129574 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129574 Gene

Proteins for LOC100129574 Gene

Post-translational modifications for LOC100129574 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129574 Gene

Domains & Families for LOC100129574 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129574 Gene

Function for LOC100129574 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129574 Gene

Localization for LOC100129574 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129574 Gene

Pathways & Interactions for LOC100129574 Gene

SuperPathways for LOC100129574 Gene

No Data Available

Interacting Proteins for LOC100129574 Gene

Gene Ontology (GO) - Biological Process for LOC100129574 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129574 Gene

Drugs & Compounds for LOC100129574 Gene

No Compound Related Data Available

Transcripts for LOC100129574 Gene

mRNA/cDNA for LOC100129574 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129574 Gene

No ASD Table

Relevant External Links for LOC100129574 Gene

GeneLoc Exon Structure for
LOC100129574

Expression for LOC100129574 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129574 Gene

genes like me logo Genes that share expression patterns with LOC100129574: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129574 Gene

Orthologs for LOC100129574 Gene

Evolution for LOC100129574 Gene

ENSEMBL:
Gene Tree for LOC100129574 (if available)
TreeFam:
Gene Tree for LOC100129574 (if available)

No data available for Orthologs for LOC100129574 Gene

Paralogs for LOC100129574 Gene

No data available for Paralogs for LOC100129574 Gene

Variants for LOC100129574 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129574 Gene

Disorders for LOC100129574 Gene

No disorders were found for LOC100129574 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129574 Gene

Publications for LOC100129574 Gene

No publications were found for LOC100129574 Gene.

Products for LOC100129574 Gene

Sources for LOC100129574 Gene

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