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Aliases for LOC100129573 Gene

Aliases for LOC100129573 Gene

  • TRNA Methyltransferase 2 Homolog B (S. Cerevisiae) Pseudogene 3
  • TRM2 TRNA Methyltransferase 2 Homolog B (S. Cerevisiae) Pseudogene 3
  • AL078645.2 5

External Ids for LOC100129573 Gene

Previous GeneCards Identifiers for LOC100129573 Gene

  • GC01U901938
  • GC01P182799
  • GC01P184536

Summaries for LOC100129573 Gene

GeneCards Summary for LOC100129573 Gene

LOC100129573 (TRNA Methyltransferase 2 Homolog B (S. Cerevisiae) Pseudogene) is a Pseudogene.

Additional gene information for LOC100129573 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129573 Gene

Genomics for LOC100129573 Gene

GeneHancer (GH) Regulatory Elements for LOC100129573 Gene

Promoters and enhancers for LOC100129573 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J184566 Enhancer 0.6 ENCODE 650.7 +1.5 1529 2.8 FOXA2 RXRA CEBPB REST CEBPG RAD21 YY1 SP1 JUND ATF3 LOC100129573 C1orf21 PIR44521
GH01J184561 Enhancer 0.7 Ensembl ENCODE 0.7 -4.1 -4143 0.8 SCRT1 ZNF121 GATA3 SCRT2 FOXP2 MEF2B NR2F2 C1orf21 LOC100129573 LOC102724857
GH01J184555 Enhancer 0.7 Ensembl ENCODE 0.4 -10.7 -10660 1.5 ZFHX2 POLR2A ZIC2 EGR2 C1orf21 LOC100129573 LOC102724857
GH01J184620 Enhancer 1.1 Ensembl ENCODE 0.2 +56.0 56045 4.4 PKNOX1 ZNF133 FEZF1 ZNF2 ZNF213 KLF7 FOS SP3 RXRA TSHZ1 PIR44521 LOC100129573 C1orf21
GH01J184588 Enhancer 0.7 ENCODE 0.3 +23.7 23650 2.6 NCOA3 GTF2F1 ESRRA NEUROD1 SIN3A RAD21 YY1 CTBP1 GATA3 HNF4G C1orf21 LOC100129573 PIR44521
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129573 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129573 Gene

Genomic Locations for LOC100129573 Gene
chr1:184,566,480-184,567,858
(GRCh38/hg38)
Size:
1,379 bases
Orientation:
Plus strand
chr1:184,535,614-184,536,992
(GRCh37/hg19)
Size:
1,379 bases
Orientation:
Plus strand

Genomic View for LOC100129573 Gene

Genes around LOC100129573 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129573 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129573 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129573 Gene

Proteins for LOC100129573 Gene

Post-translational modifications for LOC100129573 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129573 Gene

Domains & Families for LOC100129573 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129573 Gene

Function for LOC100129573 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129573 Gene

Localization for LOC100129573 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129573 Gene

Pathways & Interactions for LOC100129573 Gene

SuperPathways for LOC100129573 Gene

No Data Available

Interacting Proteins for LOC100129573 Gene

Gene Ontology (GO) - Biological Process for LOC100129573 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129573 Gene

Drugs & Compounds for LOC100129573 Gene

No Compound Related Data Available

Transcripts for LOC100129573 Gene

mRNA/cDNA for LOC100129573 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129573 Gene

No ASD Table

Relevant External Links for LOC100129573 Gene

GeneLoc Exon Structure for
LOC100129573

Expression for LOC100129573 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129573 Gene

genes like me logo Genes that share expression patterns with LOC100129573: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129573 Gene

Orthologs for LOC100129573 Gene

Evolution for LOC100129573 Gene

ENSEMBL:
Gene Tree for LOC100129573 (if available)
TreeFam:
Gene Tree for LOC100129573 (if available)

No data available for Orthologs for LOC100129573 Gene

Paralogs for LOC100129573 Gene

No data available for Paralogs for LOC100129573 Gene

Variants for LOC100129573 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129573 Gene

Disorders for LOC100129573 Gene

No disorders were found for LOC100129573 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129573 Gene

Publications for LOC100129573 Gene

No publications were found for LOC100129573 Gene.

Products for LOC100129573 Gene

Sources for LOC100129573 Gene

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