Aliases for LOC100129503 Gene

Data sources for LOC100129503 Gene:

RNA type for LOC100129503 Gene

ncRNA

Aliases for LOC100129503 Gene

External Ids for LOC100129503 Gene

Previous GeneCards Identifiers for LOC100129503 Gene

  • GC17U900885
  • GC17P076592
  • GC17P078978
  • GC17P081004

Summaries for LOC100129503 Gene

GeneCards Summary for LOC100129503 Gene

LOC100129503 (Uncharacterized LOC100129503) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100129503 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100129503 Gene

Genomics for LOC100129503 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100129503 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J081004 Promoter 0.9 Ensembl 250.7 +0.8 766 1 ZIC2 BHLHE40 FEZF1 MNT KLF7 KLF9 ZBTB5 RBM22 ZNF146 POLR2A LOC100129503 NONHSAG022968.2 lnc-BAIAP2-4 CHMP6 BAIAP2 lnc-TMEM105-1
GH17J081002 Enhancer 0.8 ENCODE 250.7 -0.8 -789 0.2 ZNF600 ATF2 NFIC ZIC2 ZBTB10 BHLHE40 FEZF1 MNT KLF7 MAX LOC100129503 NONHSAG022968.2 lnc-BAIAP2-4 CEP131 HGS TEPSIN FAAP100 ENSG00000263218 CHMP6 BAIAP2
GH17J081003 Promoter 0.7 Ensembl 250.7 0.0 -34 0.2 ZNF48 ZNF792 ZNF18 ZMYM3 POLR2A BCOR PRDM2 ZNF121 SMARCA5 LOC100129503 NONHSAG022968.2 lnc-BAIAP2-4 ENSG00000263218 CHMP6 BAIAP2 lnc-TMEM105-1
GH17J081005 Promoter 0.5 Ensembl 250.7 +1.6 1566 0.2 EZH2 HDAC2 LOC100129503 NONHSAG022968.2 lnc-BAIAP2-4 HSALNG0119221 CHMP6 BAIAP2 lnc-TMEM105-1
GH17J081000 Enhancer 0.4 Ensembl 0.7 -2.9 -2934 0.4 HNRNPL RBFOX2 ZFHX2 POLR2A ENSG00000263218 CHMP6 LOC100129503 NONHSAG022968.2 BAIAP2 lnc-TMEM105-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100129503 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the LOC100129503 gene promoter:
  • AP-2rep
  • AP-4
  • GATA-2
  • HEN1
  • Lmo2
  • MIF-1
  • MyoD
  • p53
  • Pax-5
  • YY1

Genomic Locations for LOC100129503 Gene

Latest Assembly
chr17:81,003,335-81,005,132
(GRCh38/hg38)
Size:
1,798 bases
Orientation:
Plus strand

Genomic View for LOC100129503 Gene

Genes around LOC100129503 on UCSC Golden Path with GeneCards custom track
LOC100129503 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC100129503 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129503 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129503 Gene

Proteins for LOC100129503 Gene

Post-translational modifications for LOC100129503 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129503 Gene

Domains & Families for LOC100129503 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100129503 Gene

Function for LOC100129503 Gene

miRNA for LOC100129503 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for LOC100129503 Gene

Localization for LOC100129503 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129503 Gene

Pathways & Interactions for LOC100129503 Gene

PathCards logo

SuperPathways for LOC100129503 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100129503 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100129503 Gene

Drugs & Compounds for LOC100129503 Gene

No Compound Related Data Available

Transcripts for LOC100129503 Gene

LOC100129503 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

mRNA/cDNA for LOC100129503 Gene

2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129503 Gene

No ASD Table

Relevant External Links for LOC100129503 Gene

GeneLoc Exon Structure for
LOC100129503

Expression for LOC100129503 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100129503

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129503 Gene

Orthologs for LOC100129503 Gene

Evolution for LOC100129503 Gene

ENSEMBL:
Gene Tree for LOC100129503 (if available)
TreeFam:
Gene Tree for LOC100129503 (if available)

No data available for Orthologs for LOC100129503 Gene

Paralogs for LOC100129503 Gene

No data available for Paralogs for LOC100129503 Gene

Variants for LOC100129503 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC100129503 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129503 Gene

Disorders for LOC100129503 Gene

No disorders were found for LOC100129503 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129503 Gene

Publications for LOC100129503 Gene

No publications were found for LOC100129503 Gene.

No data available for Mastermind for LOC100129503 Gene

Products for LOC100129503 Gene

Sources for LOC100129503 Gene