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Aliases for LOC100129456 Gene

Subcategory (RNA class) for LOC100129456 Gene

lncRNA

Aliases for LOC100129456 Gene

  • Heat Shock Protein 90kDa Alpha Family Class B Member 1 Pseudogene 3
  • AC013410.1 5

External Ids for LOC100129456 Gene

ORGUL Members for LOC100129456 Gene

Previous GeneCards Identifiers for LOC100129456 Gene

  • GC02U901323
  • GC02M174148
  • GC02M174440

Summaries for LOC100129456 Gene

GeneCards Summary for LOC100129456 Gene

LOC100129456 (Heat Shock Protein 90kDa Alpha Family Class B Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC100129456 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129456 Gene

Genomics for LOC100129456 Gene

GeneHancer (GH) Regulatory Elements for LOC100129456 Gene

Promoters and enhancers for LOC100129456 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I173571 Enhancer 0.9 Ensembl ENCODE 0.8 +4.1 4120 2.3 CTCF MAX SIN3A CEBPG FEZF1 RAD21 CTBP1 GATA3 SMC3 TCF7L2 LOC100129456 PPIAP66
GH02I173588 Enhancer 1 Ensembl ENCODE 0.4 -13.6 -13641 3.1 ZNF133 INSM2 MZF1 SIN3A FEZF1 ZNF335 ZNF366 ZSCAN5C FOS OVOL3 LOC100129456 PIR59747
GH02I173533 Enhancer 0.7 ENCODE 0.3 +42.8 42759 0.6 HDAC1 GTF2F1 LEF1 PKNOX1 ATF1 TAF9B NFRKB SIN3A ZNF2 MTA3 LOC100129456 PPIAP66
GH02I173544 Enhancer 0.4 ENCODE 0.3 +31.5 31453 0.2 SP1 FOSL2 YY1 LOC100129456 PPIAP66
GH02I173513 Enhancer 0.6 UCNEbase 0.2 +62.8 62779 0.3 PKNOX1 POLR2A PPIAP66 LOC100129456
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129456 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129456 Gene

Genomic Locations for LOC100129456 Gene
chr2:173,575,110-173,576,341
(GRCh38/hg38)
Size:
1,232 bases
Orientation:
Minus strand
chr2:174,439,838-174,441,069
(GRCh37/hg19)

Genomic View for LOC100129456 Gene

Genes around LOC100129456 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129456 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129456 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129456 Gene

Proteins for LOC100129456 Gene

Post-translational modifications for LOC100129456 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129456 Gene

Domains & Families for LOC100129456 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129456 Gene

Function for LOC100129456 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129456 Gene

Localization for LOC100129456 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129456 Gene

Pathways & Interactions for LOC100129456 Gene

SuperPathways for LOC100129456 Gene

No Data Available

Interacting Proteins for LOC100129456 Gene

Gene Ontology (GO) - Biological Process for LOC100129456 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129456 Gene

Drugs & Compounds for LOC100129456 Gene

No Compound Related Data Available

Transcripts for LOC100129456 Gene

mRNA/cDNA for LOC100129456 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129456 Gene

No ASD Table

Relevant External Links for LOC100129456 Gene

GeneLoc Exon Structure for
LOC100129456

Expression for LOC100129456 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129456 Gene

genes like me logo Genes that share expression patterns with LOC100129456: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129456 Gene

Orthologs for LOC100129456 Gene

Evolution for LOC100129456 Gene

ENSEMBL:
Gene Tree for LOC100129456 (if available)
TreeFam:
Gene Tree for LOC100129456 (if available)

No data available for Orthologs for LOC100129456 Gene

Paralogs for LOC100129456 Gene

No data available for Paralogs for LOC100129456 Gene

Variants for LOC100129456 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129456 Gene

Disorders for LOC100129456 Gene

No disorders were found for LOC100129456 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129456 Gene

Publications for LOC100129456 Gene

No publications were found for LOC100129456 Gene.

Products for LOC100129456 Gene

Sources for LOC100129456 Gene

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