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Aliases for LOC100129404 Gene

Aliases for LOC100129404 Gene

  • Matrix Metallopeptidase 12 (Macrophage Elastase) Pseudogene 3
  • AC079097.1 5

External Ids for LOC100129404 Gene

Previous GeneCards Identifiers for LOC100129404 Gene

  • GC08U900889
  • GC08M026112

Summaries for LOC100129404 Gene

GeneCards Summary for LOC100129404 Gene

LOC100129404 (Matrix Metallopeptidase 12 (Macrophage Elastase) Pseudogene) is a Pseudogene.

Additional gene information for LOC100129404 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129404 Gene

Genomics for LOC100129404 Gene

GeneHancer (GH) Regulatory Elements for LOC100129404 Gene

Promoters and enhancers for LOC100129404 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J026257 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -2.0 -2047 2.3 SRF JUN ELF1 NR2F2 PPP2R2A LOC100129404
GH08J026264 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.6 -9610 3.7 HDAC1 PKNOX1 ARNT GATA2 FOS CREM CEBPB ZNF592 ZNF148 ZNF217 PPP2R2A LOC100129404
GH08J026243 Enhancer 0.7 Ensembl ENCODE 0.4 +12.6 12588 1.1 GATA3 CEBPB RUNX3 NCOA2 SDAD1P1 LOC100129404 LOC105379336
GH08J026262 Enhancer 0.6 ENCODE 0.4 -6.3 -6289 0.2 MAFG BACH1 DPF2 FOSL1 CTBP1 MAFF ZNF316 ZNF184 IKZF1 ZSCAN29 PPP2R2A LOC100129404
GH08J026278 Enhancer 0.4 ENCODE 0.3 -22.5 -22534 0.8 MITF RAD51 CEBPB SDAD1P1 PPP2R2A LOC100129404
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129404 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129404 Gene

Genomic Locations for LOC100129404 Gene
chr8:26,254,883-26,256,631
(GRCh38/hg38)
Size:
1,749 bases
Orientation:
Minus strand
chr8:26,112,399-26,114,147
(GRCh37/hg19)
Size:
1,749 bases
Orientation:
Minus strand

Genomic View for LOC100129404 Gene

Genes around LOC100129404 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129404 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129404 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129404 Gene

Proteins for LOC100129404 Gene

Post-translational modifications for LOC100129404 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129404 Gene

Domains & Families for LOC100129404 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129404 Gene

Function for LOC100129404 Gene

Phenotypes From GWAS Catalog for LOC100129404 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129404 Gene

Localization for LOC100129404 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129404 Gene

Pathways & Interactions for LOC100129404 Gene

SuperPathways for LOC100129404 Gene

No Data Available

Interacting Proteins for LOC100129404 Gene

Gene Ontology (GO) - Biological Process for LOC100129404 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129404 Gene

Drugs & Compounds for LOC100129404 Gene

No Compound Related Data Available

Transcripts for LOC100129404 Gene

mRNA/cDNA for LOC100129404 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129404 Gene

No ASD Table

Relevant External Links for LOC100129404 Gene

GeneLoc Exon Structure for
LOC100129404

Expression for LOC100129404 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129404 Gene

genes like me logo Genes that share expression patterns with LOC100129404: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129404 Gene

Orthologs for LOC100129404 Gene

Evolution for LOC100129404 Gene

ENSEMBL:
Gene Tree for LOC100129404 (if available)
TreeFam:
Gene Tree for LOC100129404 (if available)

No data available for Orthologs for LOC100129404 Gene

Paralogs for LOC100129404 Gene

No data available for Paralogs for LOC100129404 Gene

Variants for LOC100129404 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129404 Gene

Disorders for LOC100129404 Gene

No disorders were found for LOC100129404 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129404 Gene

Publications for LOC100129404 Gene

No publications were found for LOC100129404 Gene.

Products for LOC100129404 Gene

Sources for LOC100129404 Gene

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