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Aliases for LOC100129381 Gene

Aliases for LOC100129381 Gene

  • Ribosomal Protein S7 Pseudogene 3
  • AL031282.1 5

External Ids for LOC100129381 Gene

Previous GeneCards Identifiers for LOC100129381 Gene

  • GC01U902004
  • GC01P001650
  • GC01P001669

Summaries for LOC100129381 Gene

GeneCards Summary for LOC100129381 Gene

LOC100129381 (Ribosomal Protein S7 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129381 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129381 Gene

Genomics for LOC100129381 Gene

GeneHancer (GH) Regulatory Elements for LOC100129381 Gene

Promoters and enhancers for LOC100129381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J001723 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.2 -183 2 HDGF PKNOX1 ARID4B SIN3A ZNF2 YY1 POLR2B ZNF766 ZNF213 E2F8 CDK11A LOC100129381 CDK11B ENSG00000268575 SLC35E2A MMP23A
GH01J000998 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 38.7 -724.0 -724023 3.8 CLOCK MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ISG15 HES4 ATAD3B WASH7P INTS11 ENSG00000230092 ENSG00000240731 CDK11A CCNL2 LOC100288379
GH01J001658 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 38 -65.4 -65386 1.9 PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 E2F8 ZNF207 CDK11B ENSG00000272004 GC01P001660 SLC35E2B LOC100129381 PIR59394
GH01J002543 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 39 +822.6 822574 7.5 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF143 SP3 NFYC MEF2D GC01M002542 LOC100288379 CDK11A SLC35E2A LOC100129381 RER1 TNFRSF14 FAAP20 MORN1 MMEL1
GH01J001397 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 37.8 -324.4 -324398 5.5 MLX DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SSRP1 CCNL2 LOC148413 INTS11 ATAD3B ENSG00000240731 LOC100288379 ENSG00000230092 SLC35E2A LOC100129381 CDK11A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129381 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100129381 gene promoter:
  • CREB
  • deltaCREB

Genomic Locations for LOC100129381 Gene

Genomic Locations for LOC100129381 Gene
chr1:1,724,512-1,737,291
(GRCh38/hg38)
Size:
12,780 bases
Orientation:
Plus strand
chr1:1,655,951-1,668,690
(GRCh37/hg19)
Size:
12,740 bases
Orientation:
Plus strand

Genomic View for LOC100129381 Gene

Genes around LOC100129381 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129381 Gene

Proteins for LOC100129381 Gene

Post-translational modifications for LOC100129381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129381 Gene

Domains & Families for LOC100129381 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129381 Gene

Function for LOC100129381 Gene

Phenotypes From GWAS Catalog for LOC100129381 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129381 Gene

Localization for LOC100129381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129381 Gene

Pathways & Interactions for LOC100129381 Gene

SuperPathways for LOC100129381 Gene

No Data Available

Interacting Proteins for LOC100129381 Gene

Gene Ontology (GO) - Biological Process for LOC100129381 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129381 Gene

Drugs & Compounds for LOC100129381 Gene

No Compound Related Data Available

Transcripts for LOC100129381 Gene

mRNA/cDNA for LOC100129381 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129381 Gene

No ASD Table

Relevant External Links for LOC100129381 Gene

GeneLoc Exon Structure for
LOC100129381

Expression for LOC100129381 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129381 Gene

genes like me logo Genes that share expression patterns with LOC100129381: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129381 Gene

Orthologs for LOC100129381 Gene

Evolution for LOC100129381 Gene

ENSEMBL:
Gene Tree for LOC100129381 (if available)
TreeFam:
Gene Tree for LOC100129381 (if available)

No data available for Orthologs for LOC100129381 Gene

Paralogs for LOC100129381 Gene

No data available for Paralogs for LOC100129381 Gene

Variants for LOC100129381 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129381 Gene

Disorders for LOC100129381 Gene

No disorders were found for LOC100129381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129381 Gene

Publications for LOC100129381 Gene

No publications were found for LOC100129381 Gene.

Products for LOC100129381 Gene

Sources for LOC100129381 Gene

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