Aliases for LOC100129293 Gene

Aliases for LOC100129293 Gene

  • IgLON Family Member 5 Pseudogene 3

External Ids for LOC100129293 Gene

Previous GeneCards Identifiers for LOC100129293 Gene

  • GC07U902506
  • GC07M063665
  • GC07M064030
  • GC07M064568
  • GC07M064572
  • GC07M064575
  • GC07M064578
  • GC07M064569

Summaries for LOC100129293 Gene

GeneCards Summary for LOC100129293 Gene

LOC100129293 (IgLON Family Member 5 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129293 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100129293 Gene

Genomics for LOC100129293 Gene

GeneHancer (GH) Regulatory Elements for LOC100129293 Gene

Promoters and enhancers for LOC100129293 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J064569 Promoter/Enhancer 0.8 Ensembl ENCODE 500.7 +0.0 36 2.4 CTCF ZNF48 EZH2 HNRNPLL ENSG00000213642 LOC100129293 lnc-ZNF107-5 ZNF107 YWHAEP1 ZNF680P1 ZNF138 GUSBP6 BNIP3P11 RF00017-6205
GH07J064574 Promoter/Enhancer 0.8 ENCODE CraniofacialAtlas 0.7 -4.2 -4218 1.1 MXI1 POLR2A TAF1 RFX5 YY1 SIN3A LOC100128885 ZNF680P1 ZNF138 ENSG00000213642 LOC100129293 RF00017-6205
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100129293 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100129293 gene promoter:
  • GATA-3
  • GR
  • GR-alpha
  • Nkx3-1
  • Nkx3-1 v1
  • Nkx3-1 v2
  • Nkx3-1 v3
  • Nkx3-1 v4
  • Pax-2
  • Pax-2a

Genomic Locations for LOC100129293 Gene

Genomic Locations for LOC100129293 Gene
chr7:64,567,870-64,570,437
(GRCh38/hg38)
Size:
2,568 bases
Orientation:
Minus strand
chr7:64,028,248-64,030,815
(GRCh37/hg19)
Size:
2,568 bases
Orientation:
Minus strand

Genomic View for LOC100129293 Gene

Genes around LOC100129293 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129293 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129293 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129293 Gene

Proteins for LOC100129293 Gene

Post-translational modifications for LOC100129293 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129293 Gene

Domains & Families for LOC100129293 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100129293 Gene

Function for LOC100129293 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129293 Gene

Localization for LOC100129293 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129293 Gene

Pathways & Interactions for LOC100129293 Gene

PathCards logo

SuperPathways for LOC100129293 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100129293 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100129293 Gene

Drugs & Compounds for LOC100129293 Gene

No Compound Related Data Available

Transcripts for LOC100129293 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129293 Gene

No ASD Table

Relevant External Links for LOC100129293 Gene

GeneLoc Exon Structure for
LOC100129293

No data available for mRNA/cDNA for LOC100129293 Gene

Expression for LOC100129293 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100129293 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129293 Gene

This gene is overexpressed in Brain - Hypothalamus (x4.1).
genes like me logo Genes that share expression patterns with LOC100129293: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129293 Gene

Orthologs for LOC100129293 Gene

No data available for Orthologs and Evolution for LOC100129293 Gene

Paralogs for LOC100129293 Gene

No data available for Paralogs for LOC100129293 Gene

Variants for LOC100129293 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129293 Gene

Disorders for LOC100129293 Gene

No disorders were found for LOC100129293 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129293 Gene

Publications for LOC100129293 Gene

No publications were found for LOC100129293 Gene.

No data available for Mastermind for LOC100129293 Gene

Products for LOC100129293 Gene

Sources for LOC100129293 Gene