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Aliases for LOC100129168 Gene

Aliases for LOC100129168 Gene

  • Chromosome 6 Open Reading Frame 203 Pseudogene 3
  • AP000563.1 5

External Ids for LOC100129168 Gene

Previous GeneCards Identifiers for LOC100129168 Gene

  • GC21U900264
  • GC21P031748
  • GC21P032823

Summaries for LOC100129168 Gene

GeneCards Summary for LOC100129168 Gene

LOC100129168 (Chromosome 6 Open Reading Frame 203 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129168 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129168 Gene

Genomics for LOC100129168 Gene

GeneHancer (GH) Regulatory Elements for LOC100129168 Gene

Promoters and enhancers for LOC100129168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I031450 Enhancer 0.2 ENCODE 550.8 -1.1 -1132 0.7 LOC100129168 GC21M031330 TIAM1
GH21I031200 Enhancer 0.8 Ensembl ENCODE 4.6 -250.8 -250781 1.7 SRF EBF1 DPF2 ATF2 BCL11A IKZF1 ATF7 IKZF2 SPI1 GC21P031202 LOC100129168 GC21M031017 TIAM1
GH21I031407 Enhancer 1 FANTOM5 ENCODE 0.3 -42.9 -42924 3.5 HDGF ZSCAN5A PKNOX1 ZSCAN26 SUZ12 ZSCAN4 TSC22D4 CEBPG GLI4 ZNF48 SCAF4 MIS18A ENSG00000238390 TIAM1 URB1 MIS18A-AS1 LOC150051 LOC100129168 GC21M031330
GH21I031443 Enhancer 0.7 Ensembl ENCODE 0.4 -8.5 -8478 1.8 OSR2 PRDM6 ZNF189 EBF1 TIAM1 LOC150051 LOC100129168 GC21M031330
GH21I031352 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 -98.0 -97992 3.2 PKNOX1 INSM2 KLF17 FEZF1 BATF ZNF366 ZSCAN5C FOS IKZF2 EGR2 SCAF4 MIS18A GC21M031330 LOC100129168 TIAM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129168 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129168 Gene

Genomic Locations for LOC100129168 Gene
chr21:31,452,452-31,453,284
(GRCh38/hg38)
Size:
833 bases
Orientation:
Plus strand
chr21:32,824,765-32,825,597
(GRCh37/hg19)

Genomic View for LOC100129168 Gene

Genes around LOC100129168 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129168 Gene

Proteins for LOC100129168 Gene

Post-translational modifications for LOC100129168 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129168 Gene

Domains & Families for LOC100129168 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129168 Gene

Function for LOC100129168 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129168 Gene

Localization for LOC100129168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129168 Gene

Pathways & Interactions for LOC100129168 Gene

SuperPathways for LOC100129168 Gene

No Data Available

Interacting Proteins for LOC100129168 Gene

Gene Ontology (GO) - Biological Process for LOC100129168 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129168 Gene

Drugs & Compounds for LOC100129168 Gene

No Compound Related Data Available

Transcripts for LOC100129168 Gene

mRNA/cDNA for LOC100129168 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129168 Gene

No ASD Table

Relevant External Links for LOC100129168 Gene

GeneLoc Exon Structure for
LOC100129168

Expression for LOC100129168 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129168 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100129168 Gene

This gene is overexpressed in Brain - Cerebellum (x32.9) and Brain - Cerebellar Hemisphere (x12.7).
genes like me logo Genes that share expression patterns with LOC100129168: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129168 Gene

Orthologs for LOC100129168 Gene

Evolution for LOC100129168 Gene

ENSEMBL:
Gene Tree for LOC100129168 (if available)
TreeFam:
Gene Tree for LOC100129168 (if available)

No data available for Orthologs for LOC100129168 Gene

Paralogs for LOC100129168 Gene

No data available for Paralogs for LOC100129168 Gene

Variants for LOC100129168 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129168 Gene

Disorders for LOC100129168 Gene

No disorders were found for LOC100129168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129168 Gene

Publications for LOC100129168 Gene

No publications were found for LOC100129168 Gene.

Products for LOC100129168 Gene

Sources for LOC100129168 Gene

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