Aliases for LOC100129137 Gene

Aliases for LOC100129137 Gene

  • CD53 Molecule Pseudogene 3

External Ids for LOC100129137 Gene

Previous GeneCards Identifiers for LOC100129137 Gene

  • GC04U900823
  • GC04P089667
  • GC04P089448

Summaries for LOC100129137 Gene

GeneCards Summary for LOC100129137 Gene

LOC100129137 (CD53 Molecule Pseudogene) is a Pseudogene.

Additional gene information for LOC100129137 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100129137 Gene

Genomics for LOC100129137 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100129137 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J088531 Promoter/Enhancer 1.2 EPDnew FANTOM5 ENCODE 0.4 +6.2 6221 4.2 FOSL1 JUND ATF2 BHLHE40 POLR2A CHD1 HLF ATF3 NFE2L2 NANOG PYURF FAM13A-AS1 HERC3 LOC100129137 lnc-HERC5-3 RN7SKP244 NAP1L5
GH04J088539 Enhancer 0.8 Ensembl 0.4 +11.9 11939 1 CEBPA CTCF HOMEZ THAP11 REST TRIM22 SAP130 ZSCAN9 GABPB1 RAD21 FAM13A-AS1 LOC100129137 HERC3 lnc-HERC5-3 RN7SKP244 NAP1L5
GH04J088573 Enhancer 0.5 Ensembl 0.3 +46.2 46239 0.8 CTCF TEAD3 RAD21 ZNF143 ZBTB11 TEAD1 FAM13A-AS1 RN7SKP244 HERC3 LOC100129137 NAP1L5
GH04J088569 Enhancer 0.3 Ensembl 0.3 +42.3 42339 0.6 SPI1 RN7SKP244 LOC100129137 HERC3 NAP1L5
GH04J088582 Enhancer 0.3 dbSUPER 0.2 +55.2 55173 0.8 FOXA2 ZNF530 RN7SKP244 PIGY PYURF ENSG00000249755 lnc-PYURF-2 HERC3 LOC100129137 NAP1L5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100129137 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100129137 Gene

Latest Assembly
chr4:88,527,562-88,528,167
(GRCh38/hg38)
Size:
606 bases
Orientation:
Plus strand

Previous Assembly
chr4:89,448,713-89,449,318
(GRCh37/hg19 by Entrez Gene)
Size:
606 bases
Orientation:
Plus strand

Genomic View for LOC100129137 Gene

Genes around LOC100129137 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129137 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129137 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129137 Gene

Proteins for LOC100129137 Gene

Post-translational modifications for LOC100129137 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129137 Gene

Domains & Families for LOC100129137 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100129137 Gene

Function for LOC100129137 Gene

Phenotypes From GWAS Catalog for LOC100129137 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129137 Gene

Localization for LOC100129137 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129137 Gene

Pathways & Interactions for LOC100129137 Gene

PathCards logo

SuperPathways for LOC100129137 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100129137 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100129137 Gene

Drugs & Compounds for LOC100129137 Gene

No Compound Related Data Available

Transcripts for LOC100129137 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129137 Gene

No ASD Table

Relevant External Links for LOC100129137 Gene

GeneLoc Exon Structure for
LOC100129137

No data available for mRNA/cDNA for LOC100129137 Gene

Expression for LOC100129137 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100129137 Gene

genes like me logo Genes that share expression patterns with LOC100129137: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129137 Gene

Orthologs for LOC100129137 Gene

No data available for Orthologs and Evolution for LOC100129137 Gene

Paralogs for LOC100129137 Gene

No data available for Paralogs for LOC100129137 Gene

Variants for LOC100129137 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129137 Gene

Disorders for LOC100129137 Gene

No disorders were found for LOC100129137 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129137 Gene

Publications for LOC100129137 Gene

No publications were found for LOC100129137 Gene.

No data available for Mastermind for LOC100129137 Gene

Products for LOC100129137 Gene

Sources for LOC100129137 Gene