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Aliases for LOC100129137 Gene

Aliases for LOC100129137 Gene

  • CD53 Molecule Pseudogene 3
  • AC083829.1 5

External Ids for LOC100129137 Gene

Previous GeneCards Identifiers for LOC100129137 Gene

  • GC04U900823
  • GC04P089667
  • GC04P089448

Summaries for LOC100129137 Gene

GeneCards Summary for LOC100129137 Gene

LOC100129137 (CD53 Molecule Pseudogene) is a Pseudogene.

Additional gene information for LOC100129137 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129137 Gene

Genomics for LOC100129137 Gene

GeneHancer (GH) Regulatory Elements for LOC100129137 Gene

Promoters and enhancers for LOC100129137 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J088526 Enhancer 0.6 Ensembl 650.7 -0.7 -659 0.6 CTCF SRF GATA3 ZNF654 TRIM22 FOS RAD21 PRDM1 LOC100129137 ENSG00000285385 LOC101929134
GH04J088525 Enhancer 0.4 Ensembl 650.7 -2.0 -1959 0.4 ZBTB33 MLLT1 ENSG00000285385 LOC100129137 PYURF PIGY LOC101929134 ENSG00000285122
GH04J088591 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.2 +65.6 65595 3.1 PKNOX1 CLOCK ZFP64 ARID4B SIN3A ZNF2 YY1 ZNF143 FOS SP3 PYURF HERC3 GC04M088591 LOC100129137 PIGY FAM13A-AS1 ENSG00000285385 GC04M088685 RNU6-33P
GH04J088608 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.2 +84.4 84448 6 PKNOX1 SMAD1 FEZF1 IRF4 ATF7 FOS RUNX3 JUNB ZNF518A ATF4 LOC100129137 PYURF PIGY NAP1L5 HERC3 FAM13A-AS1 PPM1K GC04M088685 RNU6-33P ENSG00000285385
GH04J088230 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 10.3 -295.8 -295786 1.8 NFIC ABCG2 LOC105369192 PPM1K RNU6-112P LOC100129137 PIGY PYURF RNU6ATAC31P HERC3 RNU6-1298P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129137 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129137 Gene

Genomic Locations for LOC100129137 Gene
chr4:88,527,160-88,528,170
(GRCh38/hg38)
Size:
1,011 bases
Orientation:
Plus strand
chr4:89,448,311-89,449,321
(GRCh37/hg19)
Size:
1,011 bases
Orientation:
Plus strand

Genomic View for LOC100129137 Gene

Genes around LOC100129137 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129137 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129137 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129137 Gene

Proteins for LOC100129137 Gene

Post-translational modifications for LOC100129137 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129137 Gene

Domains & Families for LOC100129137 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129137 Gene

Function for LOC100129137 Gene

Phenotypes From GWAS Catalog for LOC100129137 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129137 Gene

Localization for LOC100129137 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129137 Gene

Pathways & Interactions for LOC100129137 Gene

SuperPathways for LOC100129137 Gene

No Data Available

Interacting Proteins for LOC100129137 Gene

Gene Ontology (GO) - Biological Process for LOC100129137 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129137 Gene

Drugs & Compounds for LOC100129137 Gene

No Compound Related Data Available

Transcripts for LOC100129137 Gene

mRNA/cDNA for LOC100129137 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129137 Gene

No ASD Table

Relevant External Links for LOC100129137 Gene

GeneLoc Exon Structure for
LOC100129137

Expression for LOC100129137 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129137 Gene

genes like me logo Genes that share expression patterns with LOC100129137: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129137 Gene

Orthologs for LOC100129137 Gene

Evolution for LOC100129137 Gene

ENSEMBL:
Gene Tree for LOC100129137 (if available)
TreeFam:
Gene Tree for LOC100129137 (if available)

No data available for Orthologs for LOC100129137 Gene

Paralogs for LOC100129137 Gene

No data available for Paralogs for LOC100129137 Gene

Variants for LOC100129137 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129137 Gene

Disorders for LOC100129137 Gene

No disorders were found for LOC100129137 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129137 Gene

Publications for LOC100129137 Gene

No publications were found for LOC100129137 Gene.

Products for LOC100129137 Gene

Sources for LOC100129137 Gene

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