Aliases for LOC100129135 Gene

Aliases for LOC100129135 Gene

  • Selenocysteine Insertion Sequence-Binding Protein 2-Like 3
  • SECIS Binding Protein 2 (SECISBP2) Pseudogene 5
  • AC114689.1 5

External Ids for LOC100129135 Gene

Previous GeneCards Identifiers for LOC100129135 Gene

  • GC18U900350
  • GC18M063607
  • GC18M065455

Summaries for LOC100129135 Gene

GeneCards Summary for LOC100129135 Gene

LOC100129135 (Selenocysteine Insertion Sequence-Binding Protein 2-Like) is a Pseudogene.

Additional gene information for LOC100129135 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100129135 Gene

Genomics for LOC100129135 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100129135 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J067766 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 +23.9 23853 1.2 ZNF629 CEBPB FOS EP300 BHLHE40 MAFK EBF1 JUN NFATC1 ZBTB21 ENSG00000263594 LOC105372172 LOC105372173 LOC100129135 lnc-DSEL-6 lnc-CCDC102B-14 DSEL LOC643542 TMX3
GH18J067782 Enhancer 0.7 Ensembl ENCODE 0.4 +7.3 7326 2.2 JUND CEBPB FOS JUN FOSL1 EP300 FOSL2 RAD21 STAT3 POLR2A LOC100129135 lnc-DSEL-6 LOC105372172 DSEL LOC643542 TMX3
GH18J067770 Enhancer 0.7 Ensembl ENCODE 0.4 +19.7 19727 1.4 NFE2 MAFF FOS MAFK MAFG JUND NFE2L2 BACH1 LOC105372172 lnc-DSEL-6 LOC100129135 lnc-CCDC102B-14 DSEL LOC643542 TMX3
GH18J067777 Enhancer 0.3 Ensembl 0.4 +13.7 13734 0.2 NFIC NFIB LOC100129135 LOC105372172 lnc-DSEL-6 lnc-CCDC102B-14 DSEL LOC643542 TMX3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100129135 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100129135 Gene

Genomic Locations for LOC100129135 Gene
chr18:67,788,268-67,791,035
(GRCh38/hg38)
Size:
2,768 bases
Orientation:
Minus strand
chr18:65,455,505-65,458,272
(GRCh37/hg19)
Size:
2,768 bases
Orientation:
Minus strand

Genomic View for LOC100129135 Gene

Genes around LOC100129135 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129135 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129135 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129135 Gene

Proteins for LOC100129135 Gene

Post-translational modifications for LOC100129135 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129135 Gene

Domains & Families for LOC100129135 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100129135 Gene

Function for LOC100129135 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129135 Gene

Localization for LOC100129135 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129135 Gene

Pathways & Interactions for LOC100129135 Gene

PathCards logo

SuperPathways for LOC100129135 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100129135 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100129135 Gene

Drugs & Compounds for LOC100129135 Gene

No Compound Related Data Available

Transcripts for LOC100129135 Gene

mRNA/cDNA for LOC100129135 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129135 Gene

No ASD Table

Relevant External Links for LOC100129135 Gene

GeneLoc Exon Structure for
LOC100129135

Expression for LOC100129135 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100129135 Gene

genes like me logo Genes that share expression patterns with LOC100129135: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129135 Gene

Orthologs for LOC100129135 Gene

Evolution for LOC100129135 Gene

ENSEMBL:
Gene Tree for LOC100129135 (if available)
TreeFam:
Gene Tree for LOC100129135 (if available)

No data available for Orthologs for LOC100129135 Gene

Paralogs for LOC100129135 Gene

No data available for Paralogs for LOC100129135 Gene

Variants for LOC100129135 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100129135 Gene

Disorders for LOC100129135 Gene

No disorders were found for LOC100129135 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100129135 Gene

Publications for LOC100129135 Gene

No publications were found for LOC100129135 Gene.

No data available for Mastermind for LOC100129135 Gene

Products for LOC100129135 Gene

Sources for LOC100129135 Gene