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Aliases for LOC100129055 Gene

Aliases for LOC100129055 Gene

  • Cyclin Y Like 1 Pseudogene 3

External Ids for LOC100129055 Gene

Previous GeneCards Identifiers for LOC100129055 Gene

  • GC10U900979
  • GC10P038504
  • GC10P038465

Summaries for LOC100129055 Gene

GeneCards Summary for LOC100129055 Gene

LOC100129055 (Cyclin Y Like 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100129055 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129055 Gene

Genomics for LOC100129055 Gene

GeneHancer (GH) Regulatory Elements for LOC100129055 Gene

Promoters and enhancers for LOC100129055 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I038201 Enhancer 0.3 FANTOM5 0.3 +25.5 25545 0.2 MNT LOC100129055 ENSG00000224761 ENSG00000226113 ENSG00000283930
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129055 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100129055 gene promoter:

Genomic Locations for LOC100129055 Gene

Genomic Locations for LOC100129055 Gene
chr10:38,175,671-38,214,345
(GRCh38/hg38)
Size:
38,675 bases
Orientation:
Plus strand
chr10:38,464,599-38,503,273
(GRCh37/hg19)

Genomic View for LOC100129055 Gene

Genes around LOC100129055 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129055 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129055 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129055 Gene

Proteins for LOC100129055 Gene

Post-translational modifications for LOC100129055 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129055 Gene

Domains & Families for LOC100129055 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129055 Gene

Function for LOC100129055 Gene

Phenotypes From GWAS Catalog for LOC100129055 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129055 Gene

Localization for LOC100129055 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129055 Gene

Pathways & Interactions for LOC100129055 Gene

SuperPathways for LOC100129055 Gene

No Data Available

Interacting Proteins for LOC100129055 Gene

Gene Ontology (GO) - Biological Process for LOC100129055 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129055 Gene

Drugs & Compounds for LOC100129055 Gene

No Compound Related Data Available

Transcripts for LOC100129055 Gene

mRNA/cDNA for LOC100129055 Gene

(2) Additional mRNA sequences :

Unigene Clusters for LOC100129055 Gene

Cyclin Y-like pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129055 Gene

No ASD Table

Relevant External Links for LOC100129055 Gene

GeneLoc Exon Structure for
LOC100129055

Expression for LOC100129055 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129055 Gene

SOURCE GeneReport for Unigene cluster for LOC100129055 Gene:

Hs.148265
genes like me logo Genes that share expression patterns with LOC100129055: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129055 Gene

Orthologs for LOC100129055 Gene

No data available for Orthologs and Evolution for LOC100129055 Gene

Paralogs for LOC100129055 Gene

No data available for Paralogs for LOC100129055 Gene

Variants for LOC100129055 Gene

Sequence variations from dbSNP and Humsavar for LOC100129055 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000000999 -- 38,190,723(+) A/G intron_variant
rs1000107848 -- 38,205,660(+) G/A intron_variant
rs1000154108 -- 38,209,021(+) A/T intron_variant
rs1000250379 -- 38,174,070(+) G/C upstream_transcript_variant
rs1000329094 -- 38,203,043(+) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100129055 Gene

Variant ID Type Subtype PubMed ID
esv3576438 CNV gain 25503493
nsv477786 CNV novel sequence insertion 20440878
nsv550419 CNV gain 21841781
nsv947857 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100129055 Gene

Disorders for LOC100129055 Gene

Additional Disease Information for LOC100129055

No disorders were found for LOC100129055 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129055 Gene

Publications for LOC100129055 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC100129055 Gene

Sources for LOC100129055 Gene

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