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Aliases for LOC100129034 Gene

Subcategory (RNA class) for LOC100129034 Gene

antisense

Quality Score for this RNA gene is

1

Aliases for LOC100129034 Gene

  • Uncharacterized LOC100129034 3

External Ids for LOC100129034 Gene

ORGUL Members for LOC100129034 Gene

Previous GeneCards Identifiers for LOC100129034 Gene

  • GC09U901033
  • GC09P126155
  • GC09P096729
  • GC09P127115

Summaries for LOC100129034 Gene

GeneCards Summary for LOC100129034 Gene

LOC100129034 (Uncharacterized LOC100129034) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for LOC100129034 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100129034 Gene

Genomics for LOC100129034 Gene

GeneHancer (GH) Regulatory Elements for LOC100129034 Gene

Promoters and enhancers for LOC100129034 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I124352 Enhancer 0.4 ENCODE 550.8 +0.4 408 3.5 POLR2A NFATC1 LOC100129034 PIR47713 PIR52389 NEK6 PSMB7
GH09I124357 Enhancer 0.4 ENCODE 0.8 +4.6 4572 0.8 CTCF POLR2A ZBTB33 LOC100129034 PIR47713 GC09P124375 PSMB7 NEK6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100129034 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100129034 Gene

Genomic Locations for LOC100129034 Gene
chr9:124,353,473-124,359,186
(GRCh38/hg38)
Size:
5,714 bases
Orientation:
Plus strand
chr9:127,115,752-127,121,465
(GRCh37/hg19)

Genomic View for LOC100129034 Gene

Genes around LOC100129034 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100129034 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100129034 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100129034 Gene

Proteins for LOC100129034 Gene

Post-translational modifications for LOC100129034 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100129034 Gene

Domains & Families for LOC100129034 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100129034 Gene

Function for LOC100129034 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100129034 Gene

Localization for LOC100129034 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100129034 Gene

Pathways & Interactions for LOC100129034 Gene

SuperPathways for LOC100129034 Gene

No Data Available

Interacting Proteins for LOC100129034 Gene

Gene Ontology (GO) - Biological Process for LOC100129034 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100129034 Gene

Drugs & Compounds for LOC100129034 Gene

No Compound Related Data Available

Transcripts for LOC100129034 Gene

mRNA/cDNA for LOC100129034 Gene

(5) Additional mRNA sequences :

Unigene Clusters for LOC100129034 Gene

Uncharacterized LOC100129034:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100129034 Gene

No ASD Table

Relevant External Links for LOC100129034 Gene

GeneLoc Exon Structure for
LOC100129034

Expression for LOC100129034 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100129034 Gene

mRNA expression in normal human tissues for LOC100129034 Gene

SOURCE GeneReport for Unigene cluster for LOC100129034 Gene:

Hs.654980
genes like me logo Genes that share expression patterns with LOC100129034: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100129034 Gene

Orthologs for LOC100129034 Gene

No data available for Orthologs and Evolution for LOC100129034 Gene

Paralogs for LOC100129034 Gene

No data available for Paralogs for LOC100129034 Gene

Variants for LOC100129034 Gene

Sequence variations from dbSNP and Humsavar for LOC100129034 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000072534 -- 124,354,779(+) G/A non_coding_transcript_variant
rs1000344738 -- 124,356,875(+) G/A non_coding_transcript_variant
rs1000452467 -- 124,351,652(+) G/A upstream_transcript_variant
rs1000663479 -- 124,352,761(+) TTTTT/TTTT upstream_transcript_variant
rs1000848815 -- 124,353,401(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100129034 Gene

Variant ID Type Subtype PubMed ID
dgv12866n54 CNV loss 21841781
esv3621721 CNV gain 21293372
nsv471322 CNV loss 18288195
nsv519767 CNV loss 19592680
nsv615290 CNV loss 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100129034 Gene

Disorders for LOC100129034 Gene

Additional Disease Information for LOC100129034

No disorders were found for LOC100129034 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100129034 Gene

Publications for LOC100129034 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC100129034 Gene

Sources for LOC100129034 Gene

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