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Aliases for LOC100128775 Gene

Aliases for LOC100128775 Gene

  • Neural Precursor Cell Expressed, Developmentally Down-Regulated 8 Pseudogene 3
  • AL450063.1 5

External Ids for LOC100128775 Gene

Previous GeneCards Identifiers for LOC100128775 Gene

  • GC01U901808
  • GC01P084482
  • GC01P084711

Summaries for LOC100128775 Gene

GeneCards Summary for LOC100128775 Gene

LOC100128775 (Neural Precursor Cell Expressed, Developmentally Down-Regulated 8 Pseudogene) is a Pseudogene.

Additional gene information for LOC100128775 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128775 Gene

Genomics for LOC100128775 Gene

GeneHancer (GH) Regulatory Elements for LOC100128775 Gene

Promoters and enhancers for LOC100128775 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J084244 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE 0.7 +2.2 2248 4.6 HDAC1 ATF1 SIN3A MZF1 FEZF1 ZNF335 GATA2 ZNF366 ZSCAN5C SCRT2 ENSG00000199959 LOC100128775 GC01P084245 SAMD13 GC01M084160
GH01J084142 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 0.2 -98.5 -98524 6.7 JUN MAX JUNB REST YY1 ZNF316 JUND POLR2A FOSL2 FOS PRKACB SAMD13 RPF1 GC01P084086 LOC100128775
GH01J084162 Promoter/Enhancer 1.2 EPDnew ENCODE dbSUPER 0.2 -80.2 -80164 2.2 MXI1 RFX1 POLR2A DACH1 PRKACB GC01P084086 LOC100128775 GC01M084160
GH01J084155 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 -87.7 -87718 1.2 JUN FEZF1 BATF ZIC2 ZNF121 POLR2A NFE2 FOSL2 FOS ETV6 SAMD13 GC01P084086 PRKACB LOC100128775
GH01J084173 Enhancer 1 Ensembl ENCODE dbSUPER 0.2 -69.5 -69500 3.3 JUN ZNF398 EP300 ZEB1 SP1 JUND ZNF366 GLIS1 FOSL2 PRKACB LOC100128775 GC01P084086 GC01M084160
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128775 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100128775 gene promoter:
  • Evi-1
  • Meis-1a
  • Meis-1
  • HOXA9B
  • HOXA9
  • NF-AT
  • POU2F1
  • POU2F1a
  • NF-AT1
  • NF-AT2

Genomic Locations for LOC100128775 Gene

Genomic Locations for LOC100128775 Gene
chr1:84,244,251-84,244,847
(GRCh38/hg38)
Size:
597 bases
Orientation:
Plus strand
chr1:84,709,934-84,710,530
(GRCh37/hg19)
Size:
597 bases
Orientation:
Plus strand

Genomic View for LOC100128775 Gene

Genes around LOC100128775 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128775 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128775 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128775 Gene

Proteins for LOC100128775 Gene

Post-translational modifications for LOC100128775 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128775 Gene

Domains & Families for LOC100128775 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128775 Gene

Function for LOC100128775 Gene

Phenotypes From GWAS Catalog for LOC100128775 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128775 Gene

Localization for LOC100128775 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128775 Gene

Pathways & Interactions for LOC100128775 Gene

SuperPathways for LOC100128775 Gene

No Data Available

Interacting Proteins for LOC100128775 Gene

Gene Ontology (GO) - Biological Process for LOC100128775 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128775 Gene

Drugs & Compounds for LOC100128775 Gene

No Compound Related Data Available

Transcripts for LOC100128775 Gene

mRNA/cDNA for LOC100128775 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100128775 Gene

Neural precursor cell expressed, developmentally down-regulated 8 pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128775 Gene

No ASD Table

Relevant External Links for LOC100128775 Gene

GeneLoc Exon Structure for
LOC100128775

Expression for LOC100128775 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128775 Gene

SOURCE GeneReport for Unigene cluster for LOC100128775 Gene:

Hs.571861
genes like me logo Genes that share expression patterns with LOC100128775: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128775 Gene

Orthologs for LOC100128775 Gene

Evolution for LOC100128775 Gene

ENSEMBL:
Gene Tree for LOC100128775 (if available)
TreeFam:
Gene Tree for LOC100128775 (if available)

No data available for Orthologs for LOC100128775 Gene

Paralogs for LOC100128775 Gene

No data available for Paralogs for LOC100128775 Gene

Variants for LOC100128775 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128775 Gene

Disorders for LOC100128775 Gene

Additional Disease Information for LOC100128775

No disorders were found for LOC100128775 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100128775 Gene

Publications for LOC100128775 Gene

No publications were found for LOC100128775 Gene.

Products for LOC100128775 Gene

Sources for LOC100128775 Gene

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