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Aliases for LOC100128762 Gene

Aliases for LOC100128762 Gene

  • TERF2 Interacting Protein Pseudogene 3
  • Telomeric Repeat Binding Factor 2, Interacting Protein Pseudogene 3
  • AC091874.3 5

External Ids for LOC100128762 Gene

Previous GeneCards Identifiers for LOC100128762 Gene

  • GC05U901000
  • GC05M180329

Summaries for LOC100128762 Gene

GeneCards Summary for LOC100128762 Gene

LOC100128762 (TERF2 Interacting Protein Pseudogene) is a Pseudogene.

Additional gene information for LOC100128762 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128762 Gene

Genomics for LOC100128762 Gene

GeneHancer (GH) Regulatory Elements for LOC100128762 Gene

Promoters and enhancers for LOC100128762 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J180969 Enhancer 0.3 FANTOM5 650.7 +1.6 1630 0.2 MAFK LOC100128762 PIR60486 LOC100419853
GH05J181221 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 14.6 -252.4 -252445 4.4 CLOCK ZFP64 YBX1 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 TRIM41 TRK-CTT2-3 TRV-CAC1-5 PIR33457 PIR62653 MIR4638 ENSG00000233937 TRIM52 RACK1 CNOT6
GH05J180493 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.6 +475.4 475441 4.2 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARNT ARID4B SIN3A YBX1 ZNF2 CNOT6 HNRNPH1 MAML1 MRNIP ENSG00000233937 TRIM52 ZFP62 RUFY1 RACK1 LOC100420514
GH05J180351 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 14.6 +617.8 617809 2.4 PKNOX1 KLF17 SIN3A BMI1 ZNF335 GLIS2 ZNF213 SMARCA5 SP3 ZBTB11 GFPT2 LOC100420514 OR2AI1P LOC100419853 LOC646227 OR2V2 ENSG00000250674 ENSG00000253652 LOC100128762 LOC100289470
GH05J181172 Enhancer 1.4 Ensembl ENCODE dbSUPER 14.6 -202.9 -202897 1.8 PKNOX1 ARNT SIN3A FEZF1 ZNF2 ZNF213 E2F8 ZNF207 FOS KLF13 TRV-CAC1-4 TRL-AAG1-3 PIR55575 TRIM52 ZFP62 ENSG00000233937 CNOT6 ENSG00000248514 OR2V2 ENSG00000250765
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128762 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128762 Gene

Genomic Locations for LOC100128762 Gene
chr5:180,967,189-180,970,807
(GRCh38/hg38)
Size:
3,619 bases
Orientation:
Minus strand
chr5:180,394,189-180,397,807
(GRCh37/hg19)
Size:
3,619 bases
Orientation:
Minus strand

Genomic View for LOC100128762 Gene

Genes around LOC100128762 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128762 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128762 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128762 Gene

Proteins for LOC100128762 Gene

Post-translational modifications for LOC100128762 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128762 Gene

Domains & Families for LOC100128762 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128762 Gene

Function for LOC100128762 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128762 Gene

Localization for LOC100128762 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128762 Gene

Pathways & Interactions for LOC100128762 Gene

SuperPathways for LOC100128762 Gene

No Data Available

Interacting Proteins for LOC100128762 Gene

Gene Ontology (GO) - Biological Process for LOC100128762 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128762 Gene

Drugs & Compounds for LOC100128762 Gene

No Compound Related Data Available

Transcripts for LOC100128762 Gene

mRNA/cDNA for LOC100128762 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128762 Gene

No ASD Table

Relevant External Links for LOC100128762 Gene

GeneLoc Exon Structure for
LOC100128762

Expression for LOC100128762 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128762 Gene

genes like me logo Genes that share expression patterns with LOC100128762: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128762 Gene

Orthologs for LOC100128762 Gene

Evolution for LOC100128762 Gene

ENSEMBL:
Gene Tree for LOC100128762 (if available)
TreeFam:
Gene Tree for LOC100128762 (if available)

No data available for Orthologs for LOC100128762 Gene

Paralogs for LOC100128762 Gene

No data available for Paralogs for LOC100128762 Gene

Variants for LOC100128762 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128762 Gene

Disorders for LOC100128762 Gene

No disorders were found for LOC100128762 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128762 Gene

Publications for LOC100128762 Gene

No publications were found for LOC100128762 Gene.

Products for LOC100128762 Gene

Sources for LOC100128762 Gene

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