Aliases for LOC100128655 Gene

Aliases for LOC100128655 Gene

  • Ribosomal Protein S2 Pseudogene 3

External Ids for LOC100128655 Gene

Previous GeneCards Identifiers for LOC100128655 Gene

  • GC06U901145
  • GC06M039117
  • GC06M039008
  • GC06M039938
  • GC06M039942
  • GC06M039981
  • GC06M041320
  • GC06M039687
  • GC06M042245
  • GC06M043503

Summaries for LOC100128655 Gene

GeneCards Summary for LOC100128655 Gene

LOC100128655 (Ribosomal Protein S2 Pseudogene) is a Pseudogene.

Additional gene information for LOC100128655 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100128655 Gene

Genomics for LOC100128655 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100128655 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J039040 Enhancer 0.4 dbSUPER 250.7 -1.0 -963 1.2 NR2F1 IKZF1 SPI1 ZNF687 ENSG00000220556 LOC100128655 lnc-SAYSD1-2 GLP1R DNAH8
GH06J039036 Enhancer 0.8 Ensembl 0.7 +2.7 2684 2.2 NCOR1 IKZF1 NFIC BHLHE40 MBD2 TAL1 ATF1 STAT5A SMARCA4 EHMT2 GLP1R ENSG00000220556 LOC100128655 lnc-SAYSD1-2 HSALNG0049897 DNAH8
GH06J039035 Enhancer 0.3 dbSUPER 0.7 +4.1 4091 0.5 ZIC2 ZNF335 GLP1R ENSG00000220556 LOC100128655 lnc-SAYSD1-2 HSALNG0049897 DNAH8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100128655 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the LOC100128655 gene promoter:
  • aMEF-2
  • AML1a
  • ATF6
  • Chx10
  • MEF-2A
  • Pax-5
  • POU2F1
  • POU2F1a
  • TBP

Genomic Locations for LOC100128655 Gene

Latest Assembly
chr6:39,039,524-39,039,985
(GRCh38/hg38)
Size:
462 bases
Orientation:
Minus strand

Previous Assembly
chr6:39,007,300-39,007,761
(GRCh37/hg19 by Entrez Gene)
Size:
462 bases
Orientation:
Minus strand

Genomic View for LOC100128655 Gene

Genes around LOC100128655 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128655 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128655 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128655 Gene

Proteins for LOC100128655 Gene

Post-translational modifications for LOC100128655 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128655 Gene

Domains & Families for LOC100128655 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100128655 Gene

Function for LOC100128655 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128655 Gene

Localization for LOC100128655 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128655 Gene

Pathways & Interactions for LOC100128655 Gene

PathCards logo

SuperPathways for LOC100128655 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100128655 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100128655 Gene

Drugs & Compounds for LOC100128655 Gene

No Compound Related Data Available

Transcripts for LOC100128655 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128655 Gene

No ASD Table

Relevant External Links for LOC100128655 Gene

GeneLoc Exon Structure for
LOC100128655

No data available for mRNA/cDNA for LOC100128655 Gene

Expression for LOC100128655 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100128655 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100128655

genes like me logo Genes that share expression patterns with LOC100128655: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128655 Gene

Orthologs for LOC100128655 Gene

No data available for Orthologs and Evolution for LOC100128655 Gene

Paralogs for LOC100128655 Gene

No data available for Paralogs for LOC100128655 Gene

Variants for LOC100128655 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128655 Gene

Disorders for LOC100128655 Gene

No disorders were found for LOC100128655 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128655 Gene

Publications for LOC100128655 Gene

No publications were found for LOC100128655 Gene.

No data available for Mastermind for LOC100128655 Gene

Products for LOC100128655 Gene

Sources for LOC100128655 Gene