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Aliases for LOC100128497 Gene

Aliases for LOC100128497 Gene

  • Mitotic Spindle Assembly Checkpoint Protein MAD2A Pseudogene 3
  • AC106734.1 5

External Ids for LOC100128497 Gene

Previous GeneCards Identifiers for LOC100128497 Gene

  • GC16U900707
  • GC16M075469

Summaries for LOC100128497 Gene

GeneCards Summary for LOC100128497 Gene

LOC100128497 (Mitotic Spindle Assembly Checkpoint Protein MAD2A Pseudogene) is a Pseudogene.

Additional gene information for LOC100128497 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128497 Gene

Genomics for LOC100128497 Gene

GeneHancer (GH) Regulatory Elements for LOC100128497 Gene

Promoters and enhancers for LOC100128497 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I076946 Enhancer 0.9 ENCODE 0.4 -18.9 -18927 1.1 HDAC1 FOXA2 PKNOX1 SIN3A BATF RAD21 TCF12 EGR1 RCOR1 FOS LOC100128497 ENSG00000279856
GH16I076900 Enhancer 0.6 ENCODE 0.3 +27.1 27053 0.8 RXRA TAF1 MAX REST JUND ATF3 HNF4G HNF4A GC16M076878 LOC100128497 ENSG00000259995
GH16I076901 Enhancer 0.6 ENCODE 0.3 +27.6 27646 0.2 FOXA2 RXRA TAF1 MAX REST RAD21 YY1 JUND ATF3 HNF4G GC16M076878 LOC100128497 ENSG00000259995
GH16I076970 Enhancer 0.5 ENCODE 0.3 -42.1 -42134 0.2 SP1 STAT1 ATF3 HLF FOSL2 FOS LOC100128497 ENSG00000279856
GH16I076947 Enhancer 0.3 ENCODE 0.4 -19.9 -19879 0.8 BACH1 LOC100128497 ENSG00000279856
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128497 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128497 Gene

Genomic Locations for LOC100128497 Gene
chr16:76,878,272-76,928,085
(GRCh38/hg38)
Size:
49,814 bases
Orientation:
Minus strand
chr16:76,912,169-76,961,982
(GRCh37/hg19)

Genomic View for LOC100128497 Gene

Genes around LOC100128497 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128497 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128497 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128497 Gene

Proteins for LOC100128497 Gene

Post-translational modifications for LOC100128497 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128497 Gene

Domains & Families for LOC100128497 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128497 Gene

Function for LOC100128497 Gene

Phenotypes From GWAS Catalog for LOC100128497 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128497 Gene

Localization for LOC100128497 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128497 Gene

Pathways & Interactions for LOC100128497 Gene

SuperPathways for LOC100128497 Gene

No Data Available

Interacting Proteins for LOC100128497 Gene

Gene Ontology (GO) - Biological Process for LOC100128497 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128497 Gene

Drugs & Compounds for LOC100128497 Gene

No Compound Related Data Available

Transcripts for LOC100128497 Gene

mRNA/cDNA for LOC100128497 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128497 Gene

No ASD Table

Relevant External Links for LOC100128497 Gene

GeneLoc Exon Structure for
LOC100128497

Expression for LOC100128497 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128497 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128497 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x21.6), Brain - Cortex (x17.6), and Brain - Anterior cingulate cortex (BA24) (x11.1).
genes like me logo Genes that share expression patterns with LOC100128497: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128497 Gene

Orthologs for LOC100128497 Gene

Evolution for LOC100128497 Gene

ENSEMBL:
Gene Tree for LOC100128497 (if available)
TreeFam:
Gene Tree for LOC100128497 (if available)

No data available for Orthologs for LOC100128497 Gene

Paralogs for LOC100128497 Gene

No data available for Paralogs for LOC100128497 Gene

Variants for LOC100128497 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128497 Gene

Disorders for LOC100128497 Gene

No disorders were found for LOC100128497 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128497 Gene

Publications for LOC100128497 Gene

  1. Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations. (PMID: 18821565) Lasky-Su J … Faraone SV (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2008) 3 58

Products for LOC100128497 Gene

Sources for LOC100128497 Gene

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