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Aliases for LOC100128441 Gene

Subcategory (RNA class) for LOC100128441 Gene

lncRNA

Aliases for LOC100128441 Gene

  • General Transcription Factor IIA Subunit 2 Pseudogene 3
  • AC109329.1 5

External Ids for LOC100128441 Gene

ORGUL Members for LOC100128441 Gene

Previous GeneCards Identifiers for LOC100128441 Gene

  • GC08U900946
  • GC08M030189

Summaries for LOC100128441 Gene

GeneCards Summary for LOC100128441 Gene

LOC100128441 (General Transcription Factor IIA Subunit 2 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC100128441 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128441 Gene

Genomics for LOC100128441 Gene

GeneHancer (GH) Regulatory Elements for LOC100128441 Gene

Promoters and enhancers for LOC100128441 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I030314 Enhancer 1.1 Ensembl ENCODE 0.4 +16.9 16905 2.5 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 RXRA MIER2 REST PPIAP84 LOC100128441 TAGLN2P2
GH08I030324 Enhancer 0.8 ENCODE 0.4 +7.6 7637 0.2 HDAC1 FOXA2 RB1 BATF IRF4 RARA ZNF366 ETV6 BCLAF1 CREM RBPMS RBPMS-AS1 PPIAP84 LOC100128441 TAGLN2P2
GH08I030325 Enhancer 0.8 Ensembl 0.4 +7.4 7376 0.2 HDAC1 ELF3 FOXA2 RB1 BATF RARA ETV6 BCLAF1 CREM IKZF2 RBPMS RBPMS-AS1 LOC100128441 TAGLN2P2
GH08I030327 Enhancer 0.4 ENCODE 0.8 +3.5 3506 2 ZSCAN4 RCOR1 ZNF623 RBPMS RBPMS-AS1 PPIAP84 LOC100128441 TAGLN2P2
GH08I030338 Enhancer 0.7 ENCODE 0.4 -7.2 -7183 2 CTCF MAX ZFHX2 CTBP1 GATA3 POLR2A FOS TCF7L2 EGR2 SMARCE1 RBPMS-AS1 RBPMS PPIAP84 LOC100128441
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128441 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128441 Gene

Genomic Locations for LOC100128441 Gene
chr8:30,331,961-30,332,277
(GRCh38/hg38)
Size:
317 bases
Orientation:
Minus strand
chr8:30,189,477-30,189,793
(GRCh37/hg19)

Genomic View for LOC100128441 Gene

Genes around LOC100128441 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128441 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128441 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128441 Gene

Proteins for LOC100128441 Gene

Post-translational modifications for LOC100128441 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128441 Gene

Domains & Families for LOC100128441 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128441 Gene

Function for LOC100128441 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128441 Gene

Localization for LOC100128441 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128441 Gene

Pathways & Interactions for LOC100128441 Gene

SuperPathways for LOC100128441 Gene

No Data Available

Interacting Proteins for LOC100128441 Gene

Gene Ontology (GO) - Biological Process for LOC100128441 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128441 Gene

Drugs & Compounds for LOC100128441 Gene

No Compound Related Data Available

Transcripts for LOC100128441 Gene

mRNA/cDNA for LOC100128441 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128441 Gene

No ASD Table

Relevant External Links for LOC100128441 Gene

GeneLoc Exon Structure for
LOC100128441

Expression for LOC100128441 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128441 Gene

genes like me logo Genes that share expression patterns with LOC100128441: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128441 Gene

Orthologs for LOC100128441 Gene

Evolution for LOC100128441 Gene

ENSEMBL:
Gene Tree for LOC100128441 (if available)
TreeFam:
Gene Tree for LOC100128441 (if available)

No data available for Orthologs for LOC100128441 Gene

Paralogs for LOC100128441 Gene

No data available for Paralogs for LOC100128441 Gene

Variants for LOC100128441 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128441 Gene

Disorders for LOC100128441 Gene

No disorders were found for LOC100128441 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128441 Gene

Publications for LOC100128441 Gene

No publications were found for LOC100128441 Gene.

Products for LOC100128441 Gene

Sources for LOC100128441 Gene

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